Evidence map›Paper›PMID 40183989›Full record

ArticleCPT: pharmacometrics & systems pharmacology2025

SpatialCNS-PBPK: An R/Shiny Web-Based Application for Physiologically Based Pharmacokinetic Modeling of Spatial Pharmacokinetics in the Human Central Nervous System and Brain Tumors.

Charuka D Wickramasinghe, Seongho Kim, Jing Li

Abstract read
In one paragraph

Article in CPT: pharmacometrics & systems pharmacology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Charuka D WickramasingheKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan, USA.ORCID https://orcid.org/0009-0007-8002-0632
Seongho KimKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan, USA.
Jing LiKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan, USA.ORCID https://orcid.org/0000-0002-9924-1386

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI PAUL M STEMMER · 1985 to 2026
$68.4M
Physiologically Based Pharmacokinetic Modeling of Drug Penetration into the Human Brain and Brain TumorsR01CA255124 · NCI · WAYNE STATE UNIVERSITY · PI LI, JING, SANAI, NADER · 2021 to 2025
$1.9M
NCI NIH HHS P30 CA022453NCI NIH HHS R01 CA255124
6 · The paper itself

Abstract

Quantitative understanding of drug penetration and exposure in the human central nervous system (CNS) and brain tumors is essential for the rational development of new drugs and optimal use of existing drugs for brain cancer. To address this need, we developed and validated a novel 9-compartment permeability-limited CNS (9-CNS) physiologically based pharmacokinetic (PBPK) model, enabling mechanistic and quantitative prediction of spatial pharmacokinetics for systemically administered small-molecule drugs across different regions of the human brain, cerebrospinal fluid, and brain tumors. To make the 9-CNS model accessible to a broad range of users, we developed the SpatialCNS-PBPK app, a user-friendly, web-based R/Shiny platform built with R and Shiny programming. The app provides key functionalities for model simulation, sensitivity analysis, and pharmacokinetic parameter calculation. This tutorial introduces the development and evaluation of the SpatialCNS-PBPK app, highlights its key features and functions, and provides a step-by-step user guide for practical applications. By enhancing our ability to predict the spatial pharmacokinetics of anticancer drugs in the human CNS and brain tumors, the SpatialCNS-PBPK app serves as an invaluable computational tool and data-driven approach for advancing drug development and optimizing treatment strategies for more effective treatment of brain cancer.

Indexed as

Brain NeoplasmsCentral Nervous SystemModels, BiologicalComputer SimulationHumansInternetbrain cancer drug developmentcentral nervous system pharmacokineticsphysiologically based pharmacokinetic (PBPK) modelR/shiny interfacespatial pharmacokinetics

Identifiers

PMID40183989
PMCPMC12072228

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.