Evidence map›Paper›PMID 40183900›Full record

ArticleMycopathologia2025

De Novo Genome Assembly and Comparative Genome Analysis of the Novel Human Fungal Pathogen Trichosporon austroamericanum Type-Strain CBS 17435.

Elaine C Francisco, Marie Desnos-Ollivier, Bert Gerrits van den Ende, Ferry Hagen

Abstract readComparative Study
PubMed Full text at PMC Publisher
In one paragraph

Article in Mycopathologia, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Elaine C FranciscoDepartment of Medical Mycology, Westerdijk Fungal Biodiversity Institute (WI-KNAW), Uppsalalaan 8, 3584CT, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0002-5530-1332
Marie Desnos-OllivierNational Reference Center for Invasive Mycoses and Antifungals, Mycology Translational Research Group, Mycology Department, Institut Pasteur, Université de Paris Cité, Paris, France.ORCID http://orcid.org/0000-0002-9137-0466
Bert Gerrits van den EndeDepartment of Medical Mycology, Westerdijk Fungal Biodiversity Institute (WI-KNAW), Uppsalalaan 8, 3584CT, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0003-4439-3494
Ferry HagenDepartment of Medical Mycology, Westerdijk Fungal Biodiversity Institute (WI-KNAW), Uppsalalaan 8, 3584CT, Utrecht, The Netherlands. f.hagen@wi.knaw.nl.ORCID http://orcid.org/0000-0002-5622-1916

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 383955/2024-6FAPESP 2021/10599-3
6 · The paper itself

Abstract

Trichosporon austroamericanum is a recently described species recognized for its emerging clinical significance in invasive trichosporonosis. In this study, we present the nanopore long-read-based de novo genome assembly of the type-strain CBS 17435. Additionally, we performed genomic comparative analyses with its closest relative, Trichosporon inkin.

Indexed as

Genome, FungalTrichosporonDNA, FungalHumansNanopore SequencingPhylogenySequence Analysis, DNATrichosporonosisDNA, FungalEmerging pathogenGenome assemblyNanopore sequencingRare yeastsTrichosporon austroamericanumTrichosporon inkin

Identifiers

PMID40183900
PMCPMC11971232

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.