Evidence map›Paper›PMID 40181150›Full record

ArticleNature chemistry2025

Optical control of gene expression using a DNA G-quadruplex targeting reversible photoswitch.

Xiaoyun Zhang, Somdutta Dhir, Larry Melidis, Yuqi Chen, Zutao Yu, Angela Simeone, Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian

Abstract read
In one paragraph

Article in Nature chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Dynamic Control of Nucleic Acids Self-Assembly and Expression Using Photoswitches.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Multistate photoswitches beyond on and off.Nature communications · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Light-Activated Molecules Targeting G-Quadruplex Nucleic Acids.Chemistry (Weinheim an der Bergstrasse, Germany) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaoyun ZhangYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.ORCID 0000-0002-4132-3573
Somdutta DhirCancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, UK.
Larry MelidisCancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, UK.ORCID 0000-0001-6853-2722
Yuqi ChenYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.
Zutao YuYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.ORCID 0000-0003-1389-0818
Angela SimeoneCancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, UK.
Jochen SpiegelYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.ORCID 0000-0001-7641-1066
Santosh AdhikariYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.
Shankar BalasubramanianYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK. sb10031@cam.ac.uk.ORCID 0000-0002-0281-5815

Funding

Cancer Research UK (CRUK) C9681/A29214Cancer Research UK (CRUK) SEBINT-2024/100003Wellcome TrustWellcome Trust (Wellcome) 209441/Z/17/Z
6 · The paper itself

Abstract

Transcriptional regulation is a dynamic process that coordinates diverse cellular activities, and the use of small molecules to perturb gene expression has propelled our understanding of the fundamental regulatory mechanisms. However, small molecules typically lack the spatiotemporal precision required in highly non-invasive, controlled settings. Here we present the development of a cell-permeable small-molecule DNA G-quadruplex (G4) binder, termed G4switch, that can be reversibly toggled on and off by visible light. We have biophysically characterized the light-mediated control of G4 binding in vitro, followed by cellular, genomic mapping of G4switch to G4 targets in chromatin to confirm G4-selective, light-dependent binding in a cellular context. By deploying G4switch in living cells, we show spatiotemporal control over the expression of a set of G4-containing genes and G4-associated cell proliferation. Our studies demonstrate a chemical tool and approach to interrogate the dynamics of key biological processes directly at the molecular level in cells.

Indexed as

DNAGene Expression RegulationG-QuadruplexesLightCell ProliferationHumansDNA

Identifiers

PMID40181150
PMCPMC12141046

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.