Evidence map›Paper›PMID 40180919›Full record

ArticleScientific data2025

Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data.

Nicholas Fong, Michael S Lipnick, Ella Behnke, Yu Chou, Seif Elmankabadi, Lily Ortiz, Christopher S Almond, Isabella Auchus, Garrett W Burnett, Ronald Bisegerwa and 17 more

Abstract readDataset
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors.

Nicholas FongDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA. nick@ucsf.edu.ORCID http://orcid.org/0000-0002-3412-0735
Michael S LipnickDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA.
Ella BehnkeUniversity of California San Francisco Hypoxia Research Laboratory, San Francisco, USA.
Yu ChouUniversity of California San Francisco Hypoxia Research Laboratory, San Francisco, USA.
Seif ElmankabadiUniversity of California San Francisco Hypoxia Research Laboratory, San Francisco, USA.
Lily OrtizUniversity of California San Francisco Hypoxia Research Laboratory, San Francisco, USA.
Christopher S AlmondDepartment of Pediatrics, Stanford University School of Medicine, Palo Alto, USA.
Isabella AuchusDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA.
Garrett W BurnettDepartment of Anesthesiology, Perioperative & Pain Medicine Icahn School of Medicine, New York, NY, USA.
Ronald BisegerwaUniversity of California San Francisco Center for Health Equity in Surgery and Anesthesia, San Francisco, USA.
Desireé R ConradDepartment of Medicine and Pediatrics, Divisions of Cardiovascular Medicine and Pediatric Cardiology, Stanford University School of Medicine, Palo Alto, USA.
Carolyn M HendricksonDepartment of Medicine, Division of Pulmonary and Critical Care Medicine, University of California San Francisco, San Francisco, USA.
Shubhada HooliDepartment of Pediatrics, Division of Emergency Medicine, Baylor College of Medicine, Houston, USA.
Robert KopoticISO Oximeters Joint Working Group Co-convener, Rockville Pike, USA.
Gregory LeebUniversity of California San Francisco Hypoxia Research Laboratory, San Francisco, USA.
Daniel MartinPeninsula Medical School, University of Plymouth, Plymouth, UK.
Eric D McCollumGlobal Program in Pediatric Respiratory Sciences, Eudowood Division of Pediatric Respiratory Sciences, School of Medicine, Johns Hopkins University, Baltimore, USA.
Ellis P MonkDepartment of Sociology, Harvard University, Cambridge, USA.
Kelvin L MooreUniversity of California San Francisco School of Medicine, San Francisco, USA.
Leonid ShmuylovichDepartment of Medicine, Division of Dermatology Washington University in Saint Louis, St. Louis, USA.ORCID http://orcid.org/0000-0001-9210-7873
J Brady ScottDivision of Respiratory Care, Department of Cardiopulmonary Sciences, Rush University, Chicago, USA.
An-Kwok Ian WongDuke University Department of Medicine, Division of Pulmonary, Allergy, and Critical Care Medicine, Durham, USA.ORCID http://orcid.org/0000-0001-5668-4251
Tianyue ZhouDivision of Biostatistics, University of California, Berkeley, USA.
Romain PirracchioDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA.ORCID http://orcid.org/0000-0002-7007-4908
Philip E BicklerDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA.
John FeinerDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA.
Tyler J LawDepartment of Anesthesia and Perioperative Care, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San Francisco, San Francisco, USA. tyler.law@ucsf.edu.

Funding

Research Project 3U54MD012530 · NIMHD · DUKE UNIVERSITY · PI JOHNSON, KIMBERLY S. · 2017 to 2022
$8.8M
The Optics of Health: Race Skin Tone Minority Health and Health Disparities in the U.S.DP2MH132941 · NIMH · HARVARD UNIVERSITY · PI MONK, ELLIS · 2022 to 2022
$1.5M
Pulse Oximetry Accuracy and Integration into Pediatric Outpatient Care in South AfricaK23HL169901 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI Shubhada Hooli · 2024 to 2026
$552k
NHLBI NIH HHS K23 HL169901NIMHD NIH HHS U54 MD012530NIMH NIH HHS DP2 MH132941U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) K23HL169901U.S. Department of Health & Human Services | NIH | National Institute on Minority Health and Health Disparities (NIMHD) U54MD012530
6 · The paper itself

Abstract

The OpenOximetry Dataset stores clinical and lab pulse oximetry data. It supports measurements of arterial oxygen saturation (SaO2) by arterial blood gas co-oximetry and pulse oximetry (SpO2), alongside processed and unprocessed photoplethysmography (PPG) data and other metadata. This includes skin color measurements, finger diameter, vital signs (e.g., arterial blood pressure, end-tidal carbon dioxide), and arterial blood gas parameters (e.g., acid-base balance, hemoglobin concentration). All data, from desaturation studies to clinical trials, are collected prospectively to ensure accuracy. A common data model and standardized protocols for consistent archival and interpretation ensure consistent data archival and interpretation. The dataset aims to facilitate research on pulse oximeter performance across diverse human characteristics, addressing performance issues and promoting accurate pulse oximeters. The initial release includes controlled lab desaturation studies (CLDS), with ongoing updates planned as further data from clinical trials and CLDS become available.

Indexed as

OximetryHumansOxygen SaturationPhotoplethysmography

Identifiers

PMID40180919
PMCPMC11968964

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.