Evidence map›Paper›PMID 40179256›Full record

ArticleGenetics2025

Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development.

Paja Sijacic, Dylan H Holder, Brianna D Silver, Ellen G Krall, Courtney G Willett, Maryam Foroozani, Roger B Deal

Abstract read
In one paragraph

Article in Genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Paja SijacicDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Dylan H HolderDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Brianna D SilverDepartment of Biology, Emory University, Atlanta, GA 30322, USA.ORCID 0000-0003-3115-6908
Ellen G KrallDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Courtney G WillettDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Maryam ForoozaniDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Roger B DealDepartment of Biology, Emory University, Atlanta, GA 30322, USA.ORCID 0000-0003-1289-688X

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008490 · NIGMS · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2022
$8.0M
Chromatin targeting and transcriptional control by the histone variant H2A.ZR01GM134245 · NIGMS · EMORY UNIVERSITY · PI DEAL, ROGER BANCROFT · 2019 to 2022
$1.2M
NIGMS NIH HHS R01 GM134245NIGMS NIH HHS T32 GM008490NIH HHS R01GM134245NIH HHS T32GM008490
6 · The paper itself

Abstract

The incorporation of histone variants, distinct paralogs of core histones, into chromatin affects all DNA-templated processes in the cell, including the regulation of transcription. In recent years, much research has been focused on H2A.Z, an evolutionarily conserved H2A variant found in all eukaryotes. In order to investigate the functional conservation of H2A.Z histones during eukaryotic evolution, we transformed h2a.z-deficient Arabidopsis thaliana plants with each of the 3 human H2A.Z variants to assess their ability to rescue the mutant defects. We discovered that human H2A.Z.1 and H2A.Z.2.1 fully complement the phenotypic abnormalities of h2a.z plants despite significant divergence in the N-terminal tail sequences of Arabidopsis and human H2A.Zs. In contrast, the brain-specific splice variant H2A.Z.2.2 has a dominant-negative effect in wild-type plants, mimicking an H2A.Z deficiency phenotype. Furthermore, human H2A.Z.1 almost completely reestablishes normal H2A.Z chromatin occupancy in h2a.z plants and restores the expression of more than 84% of misexpressed genes. Finally, we used a series of N-terminal tail truncations of Arabidopsis HTA11 to reveal that the N-terminal tail of Arabidopsis H2A.Z is not necessary for normal plant development under optimal growth conditions but does play an important role in mounting proper abiotic stress responses.

Indexed as

ArabidopsisArabidopsis ProteinsHistonesChromatinConserved SequenceGene Expression Regulation, PlantHumansArabidopsis ProteinsChromatinHistoneschromatinhistone variantnucleosomeplantaetranscription

Identifiers

PMID40179256
PMCPMC12135183

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.