Evidence map›Paper›PMID 40176297›Full record

ArticleEnvironmental microbiology2025

Metabolic Insights Into Microbially Induced Calcite Formation by Bacillaceae for Application in Bio-Based Construction Materials.

Michael Seidel, Charlotte Hamley-Bennett, Bianca J Reeksting, Manpreet Bagga, Lukas Hellmann, Timothy D Hoffmann, Christiane Kraemer, Irina Dana Ofiţeru, Kevin Paine, Susanne Gebhard

Abstract read
In one paragraph

Article in Environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Beyond carbonate biomineralization: why prokaryote-driven COFrontiers in bioengineering and biotechnology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Michael SeidelInstitut für Molekulare Physiologie, Johannes-Gutenberg-Universität Mainz, Mainz, Germany.
Charlotte Hamley-BennettDepartment of Life Sciences, Milner Centre for Evolution, University of Bath, Bath, UK.
Bianca J ReekstingDepartment of Life Sciences, Milner Centre for Evolution, University of Bath, Bath, UK.
Manpreet BaggaSchool of Engineering, Newcastle University, Newcastle upon Tyne, UK.
Lukas HellmannNucleic Acid Core Facility, Johannes-Gutenberg-Universität Mainz, Mainz, Germany.
Timothy D HoffmannDepartment of Life Sciences, Milner Centre for Evolution, University of Bath, Bath, UK.ORCID https://orcid.org/0000-0001-8505-7126
Christiane KraemerNucleic Acid Core Facility, Johannes-Gutenberg-Universität Mainz, Mainz, Germany.
Irina Dana OfiţeruSchool of Engineering, Newcastle University, Newcastle upon Tyne, UK.
Kevin PaineDepartment of Architecture and Civil Engineering, University of Bath, Bath, UK.
Susanne GebhardInstitut für Molekulare Physiologie, Johannes-Gutenberg-Universität Mainz, Mainz, Germany.ORCID https://orcid.org/0000-0003-4783-6115

Funding

Engineering and Physical Sciences Research Council EP/P02081X/1Engineering Microbial-Induced Carbonate Precipitation via Meso-Scale Simulations (eMICP) EP/S013997/1
6 · The paper itself

Abstract

Microbially induced calcite precipitation (MICP) offers promising solutions for sustainable, low-cement infrastructure materials. While it is known how urea catabolism leads to biomineralisation, the non-ureolytic pathways of MICP are less clear. This limits the use of the latter in biotechnology, despite its clear benefit of avoiding toxic ammonia release. To address this knowledge gap, the present study explored the interdependence between carbon source utilisation and non-ureolytic MICP. We show that acetate can serve as the carbon source driving calcite formation in several environmental Bacillaceae isolates. This effect was particularly clear in a Solibacillus silvestris strain, which could precipitate almost all provided calcium when provided with a 2:1 acetate-to-calcium molar ratio, and we show that this process was independent of active cell growth. Genome sequencing and gene expression analyses revealed an apparent link between acetate catabolism and calcite precipitation in this species, suggesting MICP may be a calcium stress response. Development of a simple genetic system for S. silvestris led to the deletion of a proposed calcium binding protein, although this showed minimal effects on MICP. Taken together, this study provides insights into the physiological processes leading to non-ureolytic MICP, paving the way for targeted optimisation of biomineralisation for sustainable materials development.

Indexed as

BacillaceaeCalcium CarbonateConstruction MaterialsAcetatesBiomineralizationCalciumAcetatesCalciumCalcium Carbonateacetate metabolismcalcium detoxificationMICPself‐healing concrete

Identifiers

PMID40176297
PMCPMC11965779

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.