Evidence map›Paper›PMID 40172557›Full record

ArticlePhilosophical transactions. Series A, Mathematical, physical, and engineering sciences2025

Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation.

Khushi C Hiremath, Kenan Atakishi, Ernesto A B F Lima, Maguy Farhat, Bikash Panthi, Holly Langshaw, Mihir D Shanker, Wasif Talpur, Sara Thrower, Jodi Goldman and 3 more

Abstract read
In one paragraph

Article in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Article
  5. Preface to the theme issue 'Uncertainty quantification for healthcare and biological systems (Part 2)'.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Khushi C HiremathDepartment of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
Kenan AtakishiDepartment of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
Ernesto A B F LimaTexas Advanced Computing Center, The University of Texas at Austin, Austin, TX 78712, USA.ORCID 0000-0002-9219-8784
Maguy FarhatDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Bikash PanthiDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Holly LangshawDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Mihir D ShankerDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Wasif TalpurDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Sara ThrowerDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Jodi GoldmanDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Caroline ChungDepartment of Radiation Oncology, MD Anderson Cancer Center, Houston, TX 77030, USA.
Thomas E YankeelovDepartment of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
David A Hormuth IiOden Institute for Computational Engineering and Sciences, The University of Texas at Austin, Austin, TX 78712, USA.ORCID 0000-0002-9643-1694

Funding

Imaging-based tumor forecasting to predict brain tumor progression and response to therapyR01CA260003 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI QUARLES, CHRISTOPHER CHAD, YANKEELOV, THOMAS E · 2022 to 2025
$3.2M
INTEGRATING OMICS AND QUANTITATIVE IMAGING DATA IN CO-CLINICAL TRIALS TO PREDICT TREATMENT RESPONSE IN TRIPLE NEGATIVE BREAST CANCERU24CA226110 · NCI · BAYLOR COLLEGE OF MEDICINE · PI LEWIS, MICHAEL T., RUBIN, DANIEL L · 2019 to 2023
$3.2M
Image Driven Multi-Scale Modeling to Predict Treatment Response in Breast CancerU01CA174706 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO, YANKEELOV, THOMAS E · 2013 to 2018
$2.5M
Cancer Prevention and Research Institute of TexasNCI NIH HHS R01 CA260003NCI NIH HHS U01 CA174706NCI NIH HHS U24 CA226110
6 · The paper itself

Abstract

We have developed a family of biology-based mathematical models of high-grade glioma (HGG), capturing the key features of tumour growth and response to chemoradiation. We now seek to quantify the accuracy of parameter estimation and determine, when given a virtual patient cohort, which model was used to generate the tumours. In this way, we systematically test both the parameter and model identifiability. Virtual patients are generated from unique growth parameters whose growth dynamics are determined by the model family. We then assessed the ability to recover model parameters and select the model used to generate the tumour. We then evaluated the accuracy of predictions using the selected model at four weeks post-chemoradiation. We observed median parameter errors from 0.04% to 72.96%. Our model selection framework selected the model that was used to generate the data in 82% of the cases. Finally, we predicted the growth of the virtual tumours using the selected model resulting in low error at the voxel-level (concordance correlation coefficient (CCC) ranged from 0.66 to 0.99) and global level (percentage error in total tumour cellularity ranged from -12.35% to 0.07%). These results demonstrate the reliability of our framework to identify the most appropriate model under noisy conditions expected in the clinical setting.This article is part of the theme issue 'Uncertainty quantification for healthcare and biological systems (Part 2)'.

Indexed as

Brain NeoplasmsChemoradiotherapyGliomaModels, BiologicalComputer SimulationHumansNeoplasm GradingTreatment Outcomeimage-based modellingmathematical oncologymodel selectionreaction–diffusion

Identifiers

PMID40172557
PMCPMC12105797

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.