Evidence map›Paper›PMID 40172197›Full record

ArticlemBio2025

Analysis of genetic requirements and nutrient availability for

Lauren M Shull, Daniel J Wolter, Dillon E Kunkle, Katherine A Legg, David P Giedroc, Eric P Skaar, Lucas R Hoffman, Michelle L Reniere

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Lauren M ShullDepartment of Microbiology, University of Washington School of Medicine, Seattle, Washington, USA.ORCID 0000-0003-3644-0529
Daniel J WolterDepartment of Pediatrics, University of Washington School of Medicine, Seattle, Washington, USA.ORCID 0000-0003-4321-8520
Dillon E KunkleDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Katherine A LeggDepartment of Chemistry, Indiana University, Bloomington, Indiana, USA.
David P GiedrocDepartment of Chemistry, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0002-2342-1620
Eric P SkaarDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.ORCID 0000-0001-5094-8105
Lucas R HoffmanDepartment of Microbiology, University of Washington School of Medicine, Seattle, Washington, USA.
Michelle L ReniereDepartment of Microbiology, University of Washington School of Medicine, Seattle, Washington, USA.ORCID 0000-0002-0770-7784

Funding

Pathobiology of heme inducible transporters in Gram positive pathogensR01AI073843 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SKAAR, ERIC P · 2009 to 2025
$5.9M
Transition Metal Homeostasis and Reactive Sulfur Species in Bacterial PathogensR35GM118157 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI DAVID P. GIEDROC · 2016 to 2026
$5.9M
The role of redox sensing in Listeria monocytogenes pathogenesisR01AI132356 · NIAID · UNIVERSITY OF WASHINGTON · PI Joshua Woodward · 2017 to 2026
$4.4M
The Staphylococcus aureus response to nutrient zinc restriction during infectionR01AI150701 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SKAAR, ERIC P · 2020 to 2024
$2.1M
Cystic Fibrosis Foundation RENIERE20I0, SHULL22F0Cystic Fibrosis Foundation SINGH19R0, HOFFMA20Y2-OUTNIAID NIH HHS R01 AI073843NIAID NIH HHS R01 AI132356NIAID NIH HHS R01 AI150701NIGMS NIH HHS R35 GM118157NIH HHS AI150701, AI1385, AI073843NIH HHS GM118157
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Cystic FibrosisNutrientsSputumStaphylococcus aureusBacterial ProteinsCulture MediaCysteineDNA Transposable ElementsHumansStaphylococcal InfectionsBacterial ProteinsCulture MediaCysteineDNA Transposable ElementsNutrientscalprotectincysteinecystic fibrosisglutathionemetal sequestrationnutritional immunitysputumStaphylococcus aureusTn-seq

Identifiers

PMID40172197
PMCPMC12077221

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.