Evidence map›Paper›PMID 40170341›Full record

ArticleEnvironmental microbiology2025

Metagenome-Assembled Genomes and Metatranscriptome Analysis of Perfluorooctane Sulfonate-Reducing Bacteria Enriched From Activated Sludge.

Sovannlaksmy Sorn, Norihisa Matsuura, Ryo Honda

Abstract read
In one paragraph

Article in Environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sovannlaksmy SornGraduate School of Natural Science and Technology, Kanazawa University, Kanazawa, Ishikawa, Japan.ORCID https://orcid.org/0009-0003-5305-9823
Norihisa MatsuuraFaculty of Geosciences and Civil Engineering, Kanazawa University, Kanazawa, Ishikawa, Japan.ORCID https://orcid.org/0000-0001-6917-3709
Ryo HondaFaculty of Geosciences and Civil Engineering, Kanazawa University, Kanazawa, Ishikawa, Japan.ORCID https://orcid.org/0000-0003-2577-9826

Funding

Japan Society for the Promotion of Science 19K22925Japan Society for the Promotion of Science 22K19865Steel Foundation for Environmental Protection Technology
6 · The paper itself

Abstract

Per- and polyfluoroalkyl substances (PFAS) exhibit a widespread distribution across diverse global ecosystems throughout their lifecycle, posing substantial risks to human health. The persistence of PFAS makes biodegradation a challenging yet environmentally friendly solution for their treatment. In the authors' previous study, a bacterial consortium capable of reducing perfluorooctane sulfonate (PFOS) was successfully enriched from activated sludge. This study aimed to investigate the array of genes associated with PFOS reduction via biosorption and biotransformation to elucidate the metabolic pathways. Two metagenome-assembled genomes (MAGs) based on 16S rRNA sequences that share 99.86% and 97.88% similarity with Hyphomicrobium denitrificans and Paracoccus yeei, respectively were obtained. They were found to contain several genes encoding enzymes that potentially regulate biofilm formation of biosorption and facilitate the desulfonation and defluorination processes of biotransformation. Transcriptomic analysis demonstrated the high expression levels of these genes, including alkanesulfonate monooxygenase, catechol dioxygenase, (S)-2-haloacid dehalogenase and putative cytochrome P450, suggesting their involvement in PFOS biotransformation. The expression of these genes supports the presence of candidate metabolites of PFOS biotransformation detected in the previous study. These findings emphasise the significant potential of bacterial consortia and the crucial role played by genes encoding enzymes in facilitating the remediation of PFOS contaminants.

Indexed as

Alkanesulfonic AcidsBacteriaFluorocarbonsGenome, BacterialMetagenomeSewageBiodegradation, EnvironmentalBiotransformationGene Expression ProfilingPhylogenyRNA, Ribosomal, 16STranscriptomeAlkanesulfonic AcidsFluorocarbonsperfluorooctane sulfonic acidRNA, Ribosomal, 16SSewagebiosorptiondefluorinationdesulfonationmetabolic pathwaymetagenome‐assembled genome (MAG)per‐ and polyfluoroalkyl substances (PFAS)RNA‐seq

Identifiers

PMID40170341
PMCPMC11962240

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.