Evidence map›Paper›PMID 40170050›Full record

ArticleJournal of cheminformatics2025

Predictive modeling of visible-light azo-photoswitches' properties using structural features.

Said Byadi, P K Hashim, Pavel Sidorov

Abstract read
In one paragraph

Article in Journal of cheminformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Light-responsive DNA nanostructures.Nature reviews. Chemistry · 2026
    Review
  2. Impact of solvation on the photoisomerization mechanism of oxindole switches with electron-donating substituents.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Said ByadiInstitute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo, Hokkaido, 001-0021, Japan.
P K HashimResearch Institute for Electronic Science, Hokkaido University, Kita 20, Nishi 10, Kita-ku, Sapporo, Hokkaido, 001-0020, Japan.
Pavel SidorovInstitute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo, Hokkaido, 001-0021, Japan. pavel.sidorov@icredd.hokudai.ac.jp.

Funding

Japan Society for the Promotion of Science 23H03807
6 · The paper itself

Abstract

In this manuscript we present the strategy for modeling photoswitch properties (maximum absorption wavelength and thermal half-life of photoisomers) of visible-light azo-photoswitches using structural data. We compile a comprehensive data set from literature sources and perform a rigorous benchmark to select the best feature type and modeling approach. The fragment counts have demonstrated the best performance in the benchmark for both properties. We validate the models in cross-validation and on an external set. The predictions of absorption wavelengths for this set are highly accurate; on the other hand, the model for thermal half-life is less reliable, likely due to the modest size of the data set related to half-life of photoisomers, although consensus modeling approach allows to improve the predictivity. We also provide an interpretation of the modeling results using ColorAtom approach and the insights into the chemical space covered by the data set.Scientific contribution The paper provides a machine learning approach based only on structural features to predict two important photoswitch properties. Unlike previous studies, we do not use any quantum chemical features which accelerates the modeling procedure, while the accuracy of models remains high. Moreover, the fragment counts offer unique approach to model interpretation that is useful for rational design of photoswitches with desired properties.

Indexed as

AzobenzeneMachine learningMolecular descriptorsPhotoswitchesQuantitative structure–property relationship

Identifiers

PMID40170050
PMCPMC11963326

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.