Evidence map›Paper›PMID 40164741›Full record

ArticleNature neuroscience2025

DELTA: a method for brain-wide measurement of synaptic protein turnover reveals localized plasticity during learning.

Boaz Mohar, Gabriela Michel, Yi-Zhi Wang, Veronica Hernandez, Jonathan B Grimm, Jin-Yong Park, Ronak Patel, Morgan Clarke, Timothy A Brown, Cornelius Bergmann and 13 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Sex- and experience-dependent regulation of synaptic protein turnover.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. PTEN Subcellular Localization Dictates Function.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Janus Synapses as Modular Neurointerfaces.ACS applied materials & interfaces · 2026
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Sex and experience dependent regulation of synaptic protein turnover.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Boaz MoharJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA. moharb@janelia.hhmi.org.ORCID http://orcid.org/0000-0002-8613-2869
Gabriela MichelJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-6676-2863
Yi-Zhi WangDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-5279-5034
Veronica HernandezJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Jonathan B GrimmJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Jin-Yong ParkJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0009-0001-8891-8603
Ronak PatelJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Morgan ClarkeJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0009-0005-6418-0244
Timothy A BrownJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Cornelius BergmannInstitute for Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany.ORCID http://orcid.org/0009-0005-5494-8854
Kamil K GebisDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
Anika P WilenDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-8310-9946
Bian LiuSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0001-8806-820X
Richard JohnsonSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-1476-467X
Austin GravesSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-1087-3684
Tatjana TchumatchenkoInstitute for Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany.ORCID http://orcid.org/0000-0001-9137-809X
Jeffrey N SavasDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-8173-5580
Eugenio F FornasieroDepartment Institute of Neuro- and Sensory Physiology, University Medical Center Göttingen (UMG), Göttingen, Germany.ORCID http://orcid.org/0000-0001-7643-4962
Richard L HuganirSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0001-9783-5183
Paul W TillbergJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-2568-2365
Luke D LavisJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-0789-6343
Karel SvobodaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-6670-7362
Nelson SprustonJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0003-3118-1636

Funding

Understanding Amyloid Pathology - Multiomic Activity Imaging of Plaque Formation Dynamics (AmyMAP)R01AG078796 · NIA · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Jeffrey Nicholas Savas · 2022 to 2026
$2.7M
Exploring synaptic encoding of circuit-specific memory in behaving miceR01NS134842 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Richard L Huganir · 2024 to 2026
$1.9M
Orbitrap Eclipse Mass Spectrometer for Northwestern University Neuroproteomic Collaboration HubS10OD032464 · OD · NORTHWESTERN UNIVERSITY · PI SAVAS, JEFFREY NICHOLAS · 2023 to 2023
$1.3M
Deutsche Forschungsgemeinschaft (German Research Foundation) SFB1286EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) MolDynForSyn grant agreement No. 945700NIA NIH HHS R01 AG078796NIH HHS S10 OD032464NINDS NIH HHS R01 NS134842ODCDC CDC HHS S10 OD032464
6 · The paper itself

Abstract

Synaptic plasticity alters neuronal connections in response to experience, which is thought to underlie learning and memory. However, the loci of learning-related synaptic plasticity, and the degree to which plasticity is localized or distributed, remain largely unknown. Here we describe a new method, DELTA, for mapping brain-wide changes in synaptic protein turnover with single-synapse resolution, based on Janelia Fluor dyes and HaloTag knock-in mice. During associative learning, the turnover of the ionotropic glutamate receptor subunit GluA2, an indicator of synaptic plasticity, was enhanced in several brain regions, most markedly hippocampal area CA1. More broadly distributed increases in the turnover of synaptic proteins were observed in response to environmental enrichment. In CA1, GluA2 stability was regulated in an input-specific manner, with more turnover in layers containing input from CA3 compared to entorhinal cortex. DELTA will facilitate exploration of the molecular and circuit basis of learning and memory and other forms of plasticity at scales ranging from single synapses to the entire brain.

Indexed as

BrainLearningNeuronal PlasticityReceptors, AMPASynapsesAnimalsCA1 Region, HippocampalGene Knock-In TechniquesMaleMiceMice, Inbred C57BLMice, Transgenicglutamate receptor ionotropic, AMPA 2Receptors, AMPA

Identifiers

PMID40164741
PMCPMC12081306

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.