Evidence map›Paper›PMID 40163732›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Single cell-resolved cellular, transcriptional, and epigenetic changes in mouse T cell populations linked to age-associated immune decline.

Jing He, Elena Burova, Chandrika Taduriyasas, Min Ni, Christina Adler, Yi Wei, Nicole Negron, Kun Xiong, Yu Bai, Tea Shavlakadze and 4 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jing He *Regeneron Pharmaceuticals, Tarrytown, NY 10591.
Elena Burova *Regeneron Pharmaceuticals, Tarrytown, NY 10591.
Chandrika TaduriyasasRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Min NiRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Christina AdlerRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Yi WeiRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Nicole NegronRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Kun XiongRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Yu BaiRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Tea ShavlakadzeRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Ella IoffePreclinical and Early Development, Cullinan Therapeutics, Cambridge, MA 02142.ORCID 0000-0001-6117-2824
John C LinRegeneron Pharmaceuticals, Tarrytown, NY 10591.
Adolfo FerrandoRegeneron Pharmaceuticals, Tarrytown, NY 10591.
David J GlassRegeneron Pharmaceuticals, Tarrytown, NY 10591.ORCID 0000-0001-6187-4164

Funding

CSRD VA 1Regeneron Pharmaceuticals (Regeneron) 2
6 · The paper itself

Abstract

Splenic T cells are pivotal to the immune system, yet their function deteriorates with age. To elucidate the specific aspects of T cell biology affected by aging, we conducted a comprehensive multi-time point single-cell RNA sequencing study, complemented by single-cell Assay for Transposase Accessible Chromatin (ATAC) sequencing and single-cell T cell repertoire (TCR) sequencing on splenic T cells from mice across 10 different age groups. This map of age-related changes in the distribution of T cell lineages and functional states reveals broad changes in T cell function and composition, including a prominent enrichment of Gzmk+ T cells in aged mice, encompassing both CD4+ and CD8+ T cell subsets. Notably, there is a marked decrease in TCR diversity across specific T cell populations in aged mice. We identified key pathways that may underlie the perturbation of T cell functions with aging, supporting cytotoxic T cell clonal expansion with age. This study provides insights into the aging process of splenic T cells and also highlights potential targets for therapeutic intervention to enhance immune function in the elderly. The dataset should serve as a resource for further research into age-related immune dysfunction and for identifying potential therapeutic strategies.

Indexed as

AgingEpigenesis, GeneticT-LymphocytesAnimalsCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesMaleMiceMice, Inbred C57BLReceptors, Antigen, T-CellSingle-Cell AnalysisSpleenTranscription, GeneticReceptors, Antigen, T-Cellagingaging gene signaturegranzyme Ksingle-cell RNAT cells

Identifiers

PMID40163732
PMCPMC12002302

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.