Evidence map›Paper›PMID 40162689›Full record

ArticleThe Plant journal : for cell and molecular biology2025

Analysis of xyloglucan metabolism mutants highlights the prominent role of xylose cleavage in seed dormancy.

Hiromi Suzuki, Parisa Savane, Lucile Marion-Poll, Julien Sechet, Anne Frey, Adeline Berger, Katia Belcram, Nero Borrega, Mitsunori Seo, Aline Voxeur and 2 more

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Hiromi SuzukiUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Parisa SavaneUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Lucile Marion-PollDepartment of Basic Neurosciences, Faculty of Medicine, University of Geneva, Geneva, Switzerland.
Julien SechetUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Anne FreyUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Adeline BergerUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Katia BelcramUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Nero BorregaUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Mitsunori SeoRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan.
Aline VoxeurUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Grégory MouilleUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.
Annie Marion-PollUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.ORCID 0000-0003-1733-1984

Funding

EU Marie-Curie FP7 COFUND People programme Agreenskills+ FP7-609398Saclay Plant Sciences-SPS ANR-17-EUR-0007
6 · The paper itself

Abstract

Seed dormancy is an adaptive trait that delays germination until environmental conditions become favorable for seedling survival and growth. Germination has been shown to depend on the mechanical resistance strength of the covering layers (testa and endosperm) that counteracts the growth force of the embryo. Cell wall remodeling is essential in the regulation of germination processes. In Arabidopsis thaliana, the side chain trimming of xyloglucans (XyG), the major hemicellulose in cell walls, by the apoplastic XYLOSIDASE1 (XYL1), has been previously shown to regulate XyG side chain length and seed dormancy. To investigate to what extent side chain complexity impacts on cell wall mechanical properties and regulates seed germination, xyl1 mutations were combined here with mutations in the two other glycosidases, the fucosidase AXY8 and the beta-galactosidase BGAL10. Analysis of germination phenotypes in axy8 bgal10 xyl1 and in several XyG biosynthesis mutants did not show any link between dormancy depth and side chain length. The very specific effect of xyl1 on seed dormancy in single and multiple mutants was clearly correlated with alterations in XyG intracellular localization, together with release and oxidation of free oligosaccharides (XGO). Accumulation of oxidized XGO could negatively impact cell wall remodeling by impairing remobilization and polarized secretion in cell walls, thus reducing growth anisotropy in elongating organs and modifying mechanical characteristics in seed tissues.

Indexed as

ArabidopsisArabidopsis ProteinsGlucansPlant DormancyXylansXylosebeta-GalactosidaseCell WallGerminationMutationSeedsXylosidasesArabidopsis Proteinsbeta-Galactosidaseexo-1,4-beta-D-xylosidaseGlucansXylansxyloglucanXyloseXylosidasesArabidopsiscell walldormancygerminationseedxyloglucanxylosidase

Identifiers

PMID40162689
PMCPMC11956407

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.