Evidence map›Paper›PMID 40159882›Full record

ArticleMolecular and cellular biology2025

Investigating the Aggregation and Prionogenic Properties of Human Cancer-Related Proteins.

Dustin Goncharoff, Zhiqiang Du, Shriram Venkatesan, Brandon Cho, Jenny Zhao, Milad J Alasady, Dalton Huey, Hannah Ma, Jake Rosenthal, Alexander Turenitsa and 4 more

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Dustin GoncharoffDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Zhiqiang DuDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.ORCID 0000-0002-6137-6461
Shriram VenkatesanStowers Institute for Medical Research, Kansas City, Missouri, USA.
Brandon ChoDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Jenny ZhaoDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Milad J AlasadyDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Dalton HueyDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Hannah MaDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Jake RosenthalDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Alexander TurenitsaDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Coral FeldmanDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Randal HalfmannStowers Institute for Medical Research, Kansas City, Missouri, USA.ORCID 0000-0002-6592-1471
Marc L MendilloDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Liming LiDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.

Funding

Regulation and interplay of Heat Shock Factors in growth-associated proteotoxic stressesR01GM144617 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Marc Mendillo · 2022 to 2026
$1.6M
Prion-mediated protein aggregation/co-aggregation and cellular consequenceR01GM126318 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DU, ZHIQIANG · 2018 to 2022
$1.6M
Elucidating mechanisms of amyloid nucleation in vivoR01GM130927 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI HALFMANN, RANDAL ARTHUR · 2020 to 2023
$1.3M
Understanding prion-mediated transcriptional modifications and cellular phenotypes: insights into the role of Swi1 prion and prion-like behaviors of BAF proteinsR01GM155872 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Zhiqiang Du · 2024 to 2026
$969k
NIGMS NIH HHS R01 GM126318NIGMS NIH HHS R01 GM130927NIGMS NIH HHS R01 GM144617NIGMS NIH HHS R01 GM155872
6 · The paper itself

Abstract

Cancer encompasses a range of severe diseases characterized by uncontrolled cell growth and the potential for metastasis. Understanding the mechanism underlying tumorigenesis has been a central focus of cancer research. Self-propagating protein aggregates, known as prions, are linked to various biological functions and diseases, particularly those related to mammalian neurodegeneration. However, it remains unclear whether prion-like mechanisms contribute to tumorigenesis and cancer. Using a combined approach of algorithmic predictions, alongside genetic and biochemical experimentation, we identified numerous cancer-associated proteins prone to aggregation, many of which contain prion-like domains (PrLDs). These predictions were experimentally validated for both aggregation and prion-formation. We demonstrate that several PrLDs undergo nucleation-limited amyloid formation, which can alter protein activity in a mitotically heritable fashion. These include SSXT, a subunit of the chromatin-remodeling BAF (hSWI/SNF) complexes; CLOCK, a core component of the circadian clock; and EPN4, a clathrin-interacting protein involved in protein trafficking between the

Indexed as

Neoplasm ProteinsNeoplasmsPrionsProtein Aggregation, PathologicalAmyloidHumansProtein AggregatesProtein DomainsAmyloidNeoplasm ProteinsPrionsProtein AggregatesaggregationcancerPrionprion-like domain (PrLD)yeast

Identifiers

PMID40159882
PMCPMC12983077

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.