Evidence map›Paper›PMID 40159537›Full record

ArticleCommunications biology2025

A GTP-driven central carbon metabolism in the cellulolytic bacterium Ruminiclostridium cellulolyticum.

Nian Liu, Nicolas Vita, Marion Holmière, Séverine Gagnot, Gaël Brasseur, Pascale de Philip, Sandrine Pagès, Stéphanie Perret, Henri-Pierre Fierobe

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nian Liu *Aix Marseille Univ, CNRS LCB, Marseille, France.ORCID http://orcid.org/0009-0008-5839-5312
Nicolas Vita *Aix Marseille Univ, CNRS LCB, Marseille, France.
Marion HolmièreAix Marseille Univ, CNRS LCB, Marseille, France.
Séverine GagnotAix Marseille Univ, CNRS LCB, Marseille, France.
Gaël BrasseurAix Marseille Univ, CNRS LCB, Marseille, France.
Pascale de PhilipAix Marseille Univ, CNRS LCB, Marseille, France.ORCID http://orcid.org/0000-0002-9586-7680
Sandrine PagèsAix Marseille Univ, CNRS LCB, Marseille, France.
Stéphanie PerretAix Marseille Univ, CNRS LCB, Marseille, France.
Henri-Pierre FierobeAix Marseille Univ, CNRS LCB, Marseille, France. hpfierob@imm.cnrs.fr.ORCID http://orcid.org/0000-0003-0468-7180

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-21-CE43-0018Centre National de la Recherche Scientifique (National Center for Scientific Research) DBM-2022
6 · The paper itself

Abstract

In Ruminiclostridium cellulolyticum, the hexokinase and galactokinase were formerly shown to strongly prefer GTP over ATP, whereas the phosphofructokinase is PPi-dependent, suggesting an unconventional central carbon metabolism in this anaerobic bacterium. Herein, the characterization of all other kinases of this pivotal pathway led to the identification of their preferred NTP/NDP. The kinases involved in the first reactions, primarily functioning as NTP-consuming enzymes, appear to be GTP-dependent. In contrast, the enzymes catalyzing the downstream steps that mainly generate NTP, show no marked preference. Consequently, its central carbon metabolism appears essentially driven by GTP, whose cellular content nears that of ATP. Interestingly, in vivo reciprocal exchange of the GTP-dependent hexokinase in R. cellulolyticum by the ATP-dependent glucokinase from Escherichia coli and vice versa generates modified strains that still catabolize glucose and glucose disaccharides. Altogether our data suggest an unexpected diversity and flexibility in the functioning of this central pathway in bacteria.

Indexed as

CarbonCelluloseEubacterialesGuanosine TriphosphateAdenosine TriphosphateBacterial ProteinsEscherichia coliGlucoseHexokinaseAdenosine TriphosphateBacterial ProteinsCarbonCelluloseGlucoseGuanosine TriphosphateHexokinase

Identifiers

PMID40159537
PMCPMC11955521

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.