Evidence map›Paper›PMID 40158854›Full record

ArticleThe Journal of biological chemistry2025

Maackia amurensis seed lectin structure and sequence comparison with other M. amurensis lectins.

Ashok R Nayak, Cayla J Holdcraft, Ariel C Yin, Rachel E Nicoletto, Caifeng Zhao, Haiyan Zheng, Dmitry Temiakov, Gary S Goldberg

Abstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. The Journal of international medical research · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ashok R NayakBiochemistry & Molecular Biology Department, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
Cayla J HoldcraftMolecular Biology Department, Rowan Virtua SOM, Rowan University, Stratford, New Jersey, USA.
Ariel C YinMolecular Biology Department, Rowan Virtua SOM, Rowan University, Stratford, New Jersey, USA.
Rachel E NicolettoMolecular Biology Department, Rowan Virtua SOM, Rowan University, Stratford, New Jersey, USA.
Caifeng ZhaoBiological Mass Spectrometry Resources, Robert Wood Johnson Medical School, Rutgers, State University of New Jersey, Piscataway, New Jersey, USA.
Haiyan ZhengBiological Mass Spectrometry Resources, Robert Wood Johnson Medical School, Rutgers, State University of New Jersey, Piscataway, New Jersey, USA.
Dmitry TemiakovBiochemistry & Molecular Biology Department, Thomas Jefferson University, Philadelphia, Pennsylvania, USA. Electronic address: dmitry.temiakov@jeffereson.edu.
Gary S GoldbergMolecular Biology Department, Rowan Virtua SOM, Rowan University, Stratford, New Jersey, USA. Electronic address: gary.goldberg@rowan.edu.

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI Claudio Guillermo Giraudo · 1995 to 2026
$94.8M
A New Cryo-Transmission Electron Microscope at Thomas Jefferson UniversityS10OD030457 · OD · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2022 to 2022
$2.0M
Targeting OSCC cells with a lozenge to treat oral cancerR41CA268160 · NCI · SENTRIMED, INC. · PI GOLDBERG, GARY · 2022 to 2023
$604k
Cadherins, contact normalization, and targeting podoplanin to treat oral cancerR15CA271044 · NCI · ROWAN UNIVERSITY SCHOOL/OSTEOPATHIC MED · PI GOLDBERG, GARY S · 2022 to 2022
$483k
NCI NIH HHS P30 CA056036NCI NIH HHS R15 CA271044NCI NIH HHS R41 CA268160NIH HHS S10 OD030457
6 · The paper itself

Abstract

Maackia amurensis lectins, including MASL, MAA, and MAL2, are widely utilized in biochemical and medicinal research. However, the structural and functional differences between these lectins have not been defined. Here, we present a high-resolution cryo-EM structure of MASL revealing that its tetrameric assembly is directed by two intersubunit disulfide bridges. These bridges, formed by C272 residues, are central to the dimer-of-dimers assembly of a MASL tetramer. This cryo-EM structure also identifies residues involved in stabilizing the dimer interface, multiple glycosylation sites, and calcium and manganese atoms in the sugar-binding pockets of MASL. Notably, our analysis reveals that Y250 in the carbohydrate-binding site of MASL adopts a flipped conformation, likely acting as a gatekeeper that obstructs access to noncognate substrates, a feature that may contribute to MASL's substrate specificity. Sequence analysis suggests that MAA is a truncated version of MASL, while MAL2 represents a homologous isoform. Unlike MASL, neither MAL2 nor MAA contains a cysteine residue required for disulfide bridge formation. Accordingly, analysis of these proteins using reducing and nonreducing SDS-PAGE confirms that the C272 residue in MASL drives intermolecular disulfide bridge formation. These findings provide critical insights into the unique structural features of MASL that distinguish it from other M. amurensis lectins, offering a foundation for further exploration of its biological and therapeutic potential.

Indexed as

LectinsPlant LectinsSeedsAmino Acid SequenceCryoelectron MicroscopyProtein MultimerizationLectinsPlant Lectinscryo-EMlectinMaackia amurensisMaackia amurensis seed lectinMASL

Identifiers

PMID40158854
PMCPMC12059335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.