Evidence map›Paper›PMID 40158198›Full record

ArticleFEMS yeast research2025

The physiology of an engineered Saccharomyces cerevisiae strain that carries both an improved glycerol-3-phosphate and the synthetic dihydroxyacetone pathway for glycerol utilization.

Andreea Perpelea, Frederico Mendonça Bahia, Joeline Xiberras, Putu Virgina Partha Devanthi, Paola Branduardi, Mathias Klein, Elke Nevoigt

Abstract read
In one paragraph

Article in FEMS yeast research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Harnessing glycerol for secondary metabolite biosynthesis in microorganisms.World journal of microbiology & biotechnology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andreea PerpeleaSchool of Science, Constructor University, 28759 Bremen, Germany.
Frederico Mendonça BahiaSchool of Science, Constructor University, 28759 Bremen, Germany.
Joeline XiberrasSchool of Science, Constructor University, 28759 Bremen, Germany.
Putu Virgina Partha DevanthiSchool of Science, Constructor University, 28759 Bremen, Germany.
Paola BranduardiDepartment of Biotechnology and Biosciences, University of Milano Bicocca, 20126 Milan, Italy.
Mathias KleinSchool of Science, Constructor University, 28759 Bremen, Germany.
Elke NevoigtSchool of Science, Constructor University, 28759 Bremen, Germany.ORCID 0000-0001-7947-3000

Funding

German Research Foundation NE 697/7-1H2020 Marie Skłodowska-Curie Actions 764 927
6 · The paper itself

Abstract

Our laboratory previously established variants of the Saccharomyces cerevisiae strain CEN.PK113-1A able to grow in synthetic glycerol medium. One approach focused on improving the endogenous l-glycerol-3-phosphate (G3P) pathway, while a second approach aimed to replace the endogenous pathway with the dihydroxyacetone (DHA) pathway. The latter approach led to a significantly higher maximum specific growth rate (µmax) of 0.26 h-1 compared to 0.14 h-1. The current study focused on combining all genetic modifications in one strain. Apart from the so-called "TWO pathway strain" (CEN TWOPW), two isogenic control strains, CEN G3PPW and CEN DHAPW, were constructed. The µmax of CEN TWOPW (∼0.24 h-1) was virtually identical to that of CEN DHAPW. Remarkable characteristics of the strain CEN TWOPW compared to CEN DHAPW include a higher specific glycerol consumption rate, the capacity to deplete glycerol completely, and a much higher ethanol and lower biomass formation during oxygen-limited shake flask cultivations. The results obtained with different alleles of the GUT1 gene, encoding for glycerol kinase, suggest that the phenotype of the strain CEN TWOPW is at least partly attributed to the particular point mutation in the GUT1 allele used from the strain JL1, which was previously generated through adaptive laboratory evolution.

Indexed as

DihydroxyacetoneGlycerolGlycerophosphatesMetabolic EngineeringMetabolic Networks and PathwaysSaccharomyces cerevisiaeBiomassCulture MediaEthanolSaccharomyces cerevisiae Proteinsalpha-glycerophosphoric acidCulture MediaDihydroxyacetoneEthanolGlycerolGlycerophosphatesSaccharomyces cerevisiae Proteinsbaker’s yeastDHA pathwayG3P pathwayglycerolGUT1metabolic engineering

Identifiers

PMID40158198
PMCPMC11974383

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.