Evidence map›Paper›PMID 40153067›Full record

ArticleJournal of clinical immunology2025

DOCK2 Deficiency and GATA2 Haploinsufficiency Can Underlie Critical Coronavirus Disease 2019 (COVID-19) Pneumonia.

Sajjad Biglari, Leila Youssefian, Mohammad Amin Tabatabaiefar, Amir Hossein Saeidian, Bahareh Abtahi-Naeini, Erfan Khorram, Roya Sherkat, Atefeh Sohanforooshan Moghaddam, Fatemeh Mohaghegh, Maziyar Rahimi and 16 more

Abstract readCase Reports
In one paragraph

Article in Journal of clinical immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Sajjad Biglari *Department of Genetics and Molecular Biology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Leila Youssefian *Department of Pathology, Cytogenetics Laboratory, City of Hope National Medical Center, Irwindale, CA, USA.
Mohammad Amin TabatabaiefarDepartment of Genetics and Molecular Biology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Amir Hossein SaeidianCenter for Applied Genomics, Children'S Hospital of Philadelphia, Philadelphia, PA, USA.
Bahareh Abtahi-NaeiniPediatric Dermatology Division, Department of Pediatrics, Imam Hossein Children'S Hospital, Isfahan University of Medical Sciences, Isfahan, Iran.
Erfan KhorramApplied Physiology Research Center, Cardiovascular Research Institute, Isfahan University of Medical Sciences, Isfahan, Iran.
Roya SherkatImmunodeficiency Diseases Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Atefeh Sohanforooshan MoghaddamDepartment of Genetics, Faculty of Biological Science, North Tehran Branch, Islamic Azad University, Tehran, Iran.
Fatemeh MohagheghDepartment of Dermatology, Skin Diseases and Leishmaniasis Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Maziyar RahimiPediatrics Department, Isfahan University of Medical Sciences, Isfahan, Iran.
Hamid RahimiPediatric Infectious Diseases Department, Isfahan University of Medical Sciences, Isfahan, Iran.
Sharareh BabaeiDepartment of Asthma, Allergy and Clinical Immunology, Child Growth and Development Research Center, Research Institute of Primordial Prevention of Non-Communicable Disease, Isfahan University of Medical Sciences, Isfahan, Iran.
Mohammad ShahrooeiDr. Shahrooei Laboratory, Tehran, Iran.
Nikoo MozafariSkin Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Shirin ZaresharifiSkin Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Fatemeh VahidnezhadDepartment of Computer Science and Engineering Technology, University of Maryland Eastern Shore, Princess Anne, MD, USA.
Vida HomayouniImmunodeficiency Diseases Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Lam C TsoiDepartment of Dermatology, University of Michigan, Ann Arbor, MI, 48109, USA.
Johann E GudjonssonDepartment of Dermatology, University of Michigan, Ann Arbor, MI, 48109, USA.
Hakon HakonarsonCenter for Applied Genomics, Children'S Hospital of Philadelphia, Philadelphia, PA, USA.
Jean-Laurent CasanovaSt Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, Rockefeller University, New York, NY, USA.
Emmanuelle JouanguySt Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, Rockefeller University, New York, NY, USA.
Vivien BéziatSt Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, Rockefeller University, New York, NY, USA.
Qian ZhangSt Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, Rockefeller University, New York, NY, USA.
Aurélie CobatSt Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, Rockefeller University, New York, NY, USA.
Hassan VahidnezhadCenter for Applied Genomics, Children'S Hospital of Philadelphia, Philadelphia, PA, USA. Vahidnezhh@chop.edu.

Funding

Inborn errors of immunity in patients with life-threatening COVID-19R01AI163029 · NIAID · ROCKEFELLER UNIVERSITY · PI CASANOVA, JEAN-LAURENT, ZHANG, QIAN · 2021 to 2025
$3.7M
Molecular and cellular basis of epidermodysplasia verruciformisR01AI143810 · NIAID · ROCKEFELLER UNIVERSITY · PI CASANOVA, JEAN-LAURENT, JOUANGUY, EMMANUELLE · 2020 to 2024
$2.0M
LEO Fondet LF-OC-22-000965NIAID NIH HHS R01 AI143810NIAID NIH HHS R01 AI163029NIH HHS R01AI143810
6 · The paper itself

Abstract

The life-threatening coronavirus disease 2019 (COVID-19) affects about 1 in 1,000 healthy people under 50 without underlying conditions. Among patients with critical COVID-19 pneumonia, rare germline variants at genes controlling type I IFN immunity have been reported in up to 5% of patients. Causal etiologies in 80-85% of cases are still unknown. We analyzed two families with hypoxemic COVID-19 pneumonia for known single-gene inborn errors of immunity. In Family 1, two siblings with critical COVID-19 were homozygous for a DOCK2 variant, c.3624+5G>A. DOCK2 deficiency is a known T-cell disorder underlying severe viral diseases. The variant resulted in skipping exon 35, which was predicted to produce a frameshift truncated protein (p.L1157Ifs*12). The proband showed markedly decreased blood CD4 T-helper cell counts, impaired T lymphocyte transformation test, and increased serum IgG, IgA, and IgE levels, as documented in other DOCK2-deficient patients. In Family 2, the proband had lethal COVID-19 and HPV-2-associated multiple recalcitrant warts. She was heterozygous for a deletion in GATA2:c.1075_1102del28, p.W360Sfs*18. GATA2 haploinsufficiency is a known cause of severe viral diseases due to a lack of plasmacytoid dendritic cell (pDC) development. The proband had monocytopenia and a lack of circulating pDCs, as reported in other patients with GATA2 haploinsufficiency. Overall, both DOCK2 deficiency and GATA2 haploinsufficiency are associated with critical and often fatal COVID-19 pneumonia.

Indexed as

COVID-19GATA2 DeficiencyGATA2 Transcription FactorGTPase-Activating ProteinsHaploinsufficiencySARS-CoV-2FemaleGuanine Nucleotide Exchange FactorsHumansMalePedigreeDOCK2 protein, humanGATA2 protein, humanGATA2 Transcription FactorGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsCOVID-19DOCK2 deficiencyGATA2 haploinsufficiencyHuman papillomavirusInborn Errors of ImmunityLymphocytic vasculopathy

Identifiers

PMID40153067
PMCPMC11953147

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.