Evidence map›Paper›PMID 40153064›Full record

ArticleCurrent microbiology2025

Development of a Multiplex Real-Time PCR for Diagnosis of Tuberculosis and Multidrug Resistance.

Oğuz Ari, Rıza Durmaz, Sedat Vezir, Ahmet Arslanturk

Abstract readEvaluation Study
PubMed Publisher
In one paragraph

Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Oğuz AriCentral Research and Application Center, Ankara Yildirim Beyazit University, Ankara, Turkey.
Rıza DurmazDepartment of Clinical Microbiology, Faculty of Medicine, Ankara Yildirim Beyazit University, Ankara, Turkey. rdurmaz@aybu.edu.tr.ORCID http://orcid.org/0000-0001-6561-778X
Sedat VezirDepartment of Clinical Microbiology, Ankara Atatürk Sanatory Education and Research Hospital, Ankara, Turkey.
Ahmet ArslanturkGeneral Directorate of Public Health, Microbiology Reference Laboratories and Biological Products Department, National Tuberculosis Reference Laboratory, Ministry of Health, Ankara, Turkey.

Funding

Türkiye Sağlık Enstitüleri Başkanlığı 16942
6 · The paper itself

Abstract

The aim of this study was to develop a multiplex qPCR method for diagnosis of tuberculosis and multidrug resistance. The method was constructed with two multiplex qPCR mixes. Mycobacterium tuberculosis and rifampicin (RIF) resistance were assessed in the first PCR mix and isoniazid (INH) resistance in the second PCR mix. Firstly, PCR amplification conditions and concentration of primers and probes were optimized. Then, analytical sensitivity/limit of detection (LOD), analytical specificity, repeatability, accuracy, and effectiveness on clinical samples were analyzed. The LOD value was determined as 124 cfu/mL. In studies conducted on 273 clinical samples, RIF and INH resistance was detected with ≥ 99% sensitivity and specificity. No false positive or negative results were obtained in the accuracy studies. In intra-experiment, inter-experiment, and inter-lot repeatability studies, the coefficient of variation was calculated as between 0.36 and 5.3%. It was also determined that the primers/probes used in this assay did not cross-react with microorganisms other than M. tuberculosis complex. In conclusion, the method optimized in the current study has high performance characteristics indicating that it can be used as an alternative for currently available molecular methods for rapid and accurate diagnosis of pulmonary tuberculosis and multidrug resistance without needing any specific equipment. Further study with different clinical samples will be useful to provide more data regarding routine utility of this method.

Indexed as

Drug Resistance, Multiple, BacterialMultiplex Polymerase Chain ReactionMycobacterium tuberculosisReal-Time Polymerase Chain ReactionTuberculosisTuberculosis, Multidrug-ResistantAntitubercular AgentsHumansIsoniazidLimit of DetectionReproducibility of ResultsRifampinSensitivity and SpecificityAntitubercular AgentsIsoniazidRifampin

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.