Evidence map›Paper›PMID 40151640›Full record

ArticleiScience2025

Single-nucleus profiling decoding the subcortical visual pathway evolution of vertebrates.

Kuo Liao, Ya Xiang, Youning Lin, Pingfang Liao, Wenbo Xu, Zhenlong Wang, Zhenkun Zhuang

Abstract read
In one paragraph

Article in iScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kuo LiaoBGI Research, Hangzhou 310030, China.
Ya XiangBGI Research, Hangzhou 310030, China.
Youning LinBGI Research, Hangzhou 310030, China.
Pingfang LiaoBGI Research, Hangzhou 310030, China.
Wenbo XuSchool of Life Sciences, Zhengzhou University, Zhengzhou 450001, China.
Zhenlong WangSchool of Life Sciences, Zhengzhou University, Zhengzhou 450001, China.
Zhenkun ZhuangBGI Research, Hangzhou 310030, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During the evolution of vertebrates, significant transformations have occurred in the visual transmission and processing pathways. However, our understanding of the differences between two primary visual pathways in vertebrates and their evolutionary changes remains limited. The emerging technologies and comparative analysis have provided us with a more comprehensive way to decipher this process. Here, we applied single-nucleus RNA sequencing (snRNA-seq) onto the avian optic tectum, one of the key visual subcortical hubs in birds, to construct its cellular landscape. By integrating these data with mammalian snRNA-seq datasets, we revealed differences in the density of two types of thalamic-projecting excitatory neurons within the retinotectal pathway of birds and mammals. Additionally, a series of shared molecules were identified between two types of dominant visual pathways in vertebrates. Overall, this work provides a novel focus on the evolution of visual pathways and establishes a framework for their comparative analysis.

Indexed as

Evolutionary developmental biologyModel organismOrnithologyTranscriptomics

Identifiers

PMID40151640
PMCPMC11937672

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.