Evidence map›Paper›PMID 40151060›Full record

ArticleMolecular plant pathology2025

Hop Stunt Viroid Expression and Host Responses in Arabidopsis thaliana.

Xiaxia Tian, Binhui Zhan, Lingzhu He, Changyong Zhou, Yunlong Ma, Shifang Li, Zhixiang Zhang

Abstract read
In one paragraph

Article in Molecular plant pathology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaxia TianState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, China.
Binhui ZhanState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, China.
Lingzhu HeState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, China.
Changyong ZhouCitrus Research Institute, Southwest University, Chongqing, China.
Yunlong MaCenter for Biosafety, Chinese Academy of Inspection and Quarantine, Sanya, Hainan Province, China.
Shifang LiState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, China.ORCID 0000-0003-4614-1768
Zhixiang ZhangState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, China.

Funding

the National Nature Science Foundation of China 32072395
6 · The paper itself

Abstract

Arabidopsis thaliana serves as an appealing model for viroid research, though prior infection trials have largely failed. Previous studies have shown that mature circular RNAs of certain viroids can be synthesised in A. thaliana via transgenic methods. Here, we confirm this by introducing a transgene encoding the dimeric cDNA of hop stunt viroid (HSVd) genome and explore the potential of HSVd-expressing transgenic A. thaliana in viroid research. Mature HSVd circular genome RNA was detected in transgenic plants but accumulated to relatively low levels. Small RNA (sRNA) sequencing revealed minimal production of HSVd-derived sRNAs, suggesting inefficient replication. This finding highlights the importance of double-stranded replication intermediates as the primary source of viroid sRNAs. Moreover, the low replication efficiency increases the likelihood of identifying viroid-binding host factors involved in early molecular interactions using transgenic A. thaliana. Transcriptome analysis indicated that HSVd expression significantly altered the expression of thousands of A. thaliana genes, with enrichment in metabolic pathways, biosynthesis, plant hormone signalling, plant-pathogen interactions and MAPK signalling pathways. Interestingly, these pathways align with those observed in cucumber systemically infected with HSVd, suggesting that transgenic A. thaliana mimics systemic viroid infections and offers a promising model for studying viroid-host interactions. Thus, despite the challenges of establishing systemic infection, HSVd-expressing transgenic A. thaliana represents a valuable tool for advancing viroid research.

Indexed as

ArabidopsisViroidsGene Expression ProfilingGene Expression Regulation, PlantHost-Pathogen InteractionsPlant DiseasesPlants, Genetically ModifiedPlant VirusesRNA, ViralRNA, ViralArabidopsis thalianareplicationRNA silencingviroid–host interactionsviroids

Identifiers

PMID40151060
PMCPMC11950631

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.