Evidence map›Paper›PMID 40150853›Full record

ArticlePlant biotechnology journal2025

Unique starch biosynthesis pathways in wild rice revealed by multi-omics analyses.

Nurmansyah, Agnelo Furtado, Pauline Okemo, Robert J Henry

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

NurmansyahQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.
Agnelo FurtadoQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.
Pauline OkemoQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.
Robert J HenryQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.ORCID https://orcid.org/0000-0002-4060-0292

Funding

Australian Research Council CE200100015
6 · The paper itself

Abstract

Australian wild rice species (AWS) possess unique starch properties characterized by a slow digestibility rate. However, the genomic and transcriptomic variations of starch-synthesis-related genes (SSRGs) influencing starch physiochemical properties in AWS remain unclear. Here, we report comparative analyses of 72 SSRGs in wild species, including two AWS (O. meridionalis and Australian populations of O. rufipogon) and the domesticated rice gene pool. Our findings reveal that most SSRGs are more actively expressed in the early stages of seed development. Transcriptome analysis identified differential splicing patterns, with the starch synthesis pathways in Nipponbare and O. rufipogon being more similar than those in O. meridionalis. Three essential starch genes, GBSSI, SSIIa and BEIIb, were more active and had higher expression in AWS compared to Nipponbare, explaining the higher amylose content, gelatinization temperature, soft gel consistency and high retrogradation in the wild rice. Comparative genomics indicated that Asian domesticated rice evolved from a single ancestral allele of GBSSI (Wx

Indexed as

OryzaStarchAmyloseAustraliaGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantGenomicsMultiomicsPlant ProteinsTranscriptomeAmylosePlant ProteinsStarcheating and cooking qualitymulti‐omics analysesslowly digested starchwild rice

Identifiers

PMID40150853
PMCPMC12120894

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.