Evidence map›Paper›PMID 40147592›Full record

ArticlePhytochemistry2025

Studies on the epipolythiodioxopiperazine alkaloid verticillin D: Scaled production, streamlined purification, and absolute configuration.

Herma C Pierre, Devyani J Patel, Huzefa A Raja, Blaise A Darveaux, Krupa I Patel, Lina Mardiana, Alexandra Longcake, Michael J Hall, Michael R Probert, Cedric J Pearce and 1 more

Abstract read
In one paragraph

Article in Phytochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Herma C PierreDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States.
Devyani J PatelDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States.
Huzefa A RajaDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States.
Blaise A DarveauxMycosynthetix, Inc., Hillsborough, NC, 27278, United States.
Krupa I PatelDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States.
Lina MardianaIndicatrix Crystallography Ltd, Newcastle Upon Tyne, NE 1 7RU, United Kingdom; Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom; Department of Chemistry, Universitas Indonesia, Depok, Jawa Barat, 16424, Indonesia.
Alexandra LongcakeIndicatrix Crystallography Ltd, Newcastle Upon Tyne, NE 1 7RU, United Kingdom; Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom.
Michael J HallIndicatrix Crystallography Ltd, Newcastle Upon Tyne, NE 1 7RU, United Kingdom; Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom.
Michael R ProbertIndicatrix Crystallography Ltd, Newcastle Upon Tyne, NE 1 7RU, United Kingdom; Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom.
Cedric J PearceMycosynthetix, Inc., Hillsborough, NC, 27278, United States.
Nicholas H OberliesDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States. Electronic address: nicholas_oberlies@uncg.edu.

Funding

Project 3:Isolation Chemistry of Filamentous Fungi and Biological EvaluationP01CA125066 · NCI · OHIO STATE UNIVERSITY · PI JIMMY ORJALA · 2007 to 2026
$27.2M
Predoctoral Training: Innovative Technologies for Natural Products and Integrative Medicine ResearchT32AT008938 · NCCIH · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI Nadja B Cech, Jonathan Rodi Chekan · 2016 to 2026
$1.6M
NCCIH NIH HHS T32 AT008938NCI NIH HHS P01 CA125066
6 · The paper itself

Abstract

Verticillins, epipolythiodioxopiperazine alkaloids that were first described over 50 years ago, have undergone extensive cytotoxic and pharmacological evaluations over the last decade. However, of the 27 verticillin analogues in the literature, the chemistry of verticillin D, which has two additional secondary hydroxy moieties, relative to verticillin A, has remained largely unexplored since its discovery in 1999. With the goal of advancing our understanding of verticillin D, there were three main objectives with this study: improving production, streamlining purification, and assigning absolute configuration via X-ray crystallography. To begin, the production of verticillin D was analyzed across seven fungal strains, and the top producer was further assessed under two fermentation conditions. Clonostachys rosea (strain MSX51257) biosynthesized the highest amount of verticillin D, with production peaking between 15 and 25 days on rice media. Interestingly, in contrast to similar studies that yield verticillin A, the biosynthesis of verticillin D was not accompanied by a suite of structurally related verticillin analogues. As such, the purification of verticillin D was more rapid and could be accomplished without the use of HPLC. These materials were used, in part, to determine the absolute configuration of verticillin D via X-ray crystallography, allowing for assignment of the asymmetric centers at both the 13 and 13' positions as R, which has never been accomplished. This is only the third report of an X-ray structure of a verticillin analogue.

Indexed as

AlkaloidsPiperazinesCrystallography, X-RayHypocrealesMolecular ConformationMolecular StructureAlkaloidsPiperazinesClonostachys roseaEpipolythiodioxopiperazine alkaloidsVerticillin AVerticillin DX-ray crystallography

Identifiers

PMID40147592
PMCPMC12327545

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.