Evidence map›Paper›PMID 40140603›Full record

ArticleNature cell biology2025

Proteostasis and lysosomal repair deficits in transdifferentiated neurons of Alzheimer's disease.

Ching-Chieh Chou, Ryan Vest, Miguel A Prado, Joshua Wilson-Grady, Joao A Paulo, Yohei Shibuya, Patricia Moran-Losada, Ting-Ting Lee, Jian Luo, Steven P Gygi and 5 more

Abstract read
In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. From aggregate structure to disease trajectory: the role of the proteostasis network.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2026
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  20. bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Ching-Chieh ChouDepartment of Biology, Stanford University, Stanford, CA, USA. cchou6@stanford.edu.ORCID 0000-0001-8302-2915
Ryan VestDepartment of Chemical Engineering, Stanford University, Stanford, CA, USA.
Miguel A PradoDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-4914-1619
Joshua Wilson-GradyDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-4291-413X
Yohei ShibuyaDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, USA.
Patricia Moran-LosadaDepartment of Neurology and Neurological Sciences and The Phil and Penny Knight Initiative for Brain Resilience, Stanford University, Stanford, CA, USA.
Ting-Ting LeeDepartment of Biology, Stanford University, Stanford, CA, USA.
Jian LuoPalo Alto Veterans Institute for Research Inc. (PAVIR), Palo Alto, CA, USA.ORCID 0000-0002-2064-8467
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-7626-0034
Jeffery W KellyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.ORCID 0000-0001-8943-3395
Daniel FinleyDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-2076-5863
Marius WernigDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0002-5309-515X
Tony Wyss-CorayDepartment of Neurology and Neurological Sciences and The Phil and Penny Knight Initiative for Brain Resilience, Stanford University, Stanford, CA, USA.ORCID 0000-0001-5893-0831
Judith FrydmanDepartment of Biology, Stanford University, Stanford, CA, USA. jfrydman@stanford.edu.ORCID 0000-0003-2302-6943

Funding

Stanford Alzheimer's Disease Research CenterAdmin Supp: Developing iPSC models for AD and PDP30AG066515 · NIA · STANFORD UNIVERSITY · PI Lisa Goldman Rosas · 2020 to 2026
$29.0M
The proteasome in aging and neurodegenerative diseaseP01AG054407 · NIA · NORTHWESTERN UNIVERSITY · PI FINLEY, DANIEL J · 2018 to 2022
$14.0M
Working Memory in Parkinson Disease: A Cognitive & Systems Neuroscience ApproachP50AG047366 · NIA · STANFORD UNIVERSITY · PI HENDERSON, VICTOR · 2015 to 2019
$7.9M
PROTEIN FOLDING IN THE EUKARYOTIC CYTOSOLR01GM056433 · NIGMS · STANFORD UNIVERSITY · PI Judith Frydman · 1997 to 2026
$5.0M
Michael J. Fox Foundation for Parkinson's Research (Michael J. Fox Foundation) ASAP-000282NIA NIH HHS P01 AG054407NIA NIH HHS P30 AG066515NIA NIH HHS P50 AG047366NIGMS NIH HHS R01 GM056433U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) AG054407
6 · The paper itself

Abstract

Ageing is the most prominent risk factor for Alzheimer's disease (AD). However, the cellular mechanisms linking neuronal proteostasis decline to the characteristic aberrant protein deposits in the brains of patients with AD remain elusive. Here we develop transdifferentiated neurons (tNeurons) from human dermal fibroblasts as a neuronal model that retains ageing hallmarks and exhibits AD-linked vulnerabilities. Remarkably, AD tNeurons accumulate proteotoxic deposits, including phospho-tau and amyloid β, resembling those in APP mouse brains and the brains of patients with AD. Quantitative tNeuron proteomics identify ageing- and AD-linked deficits in proteostasis and organelle homeostasis, most notably in endosome-lysosomal components. Lysosomal deficits in aged tNeurons, including constitutive lysosomal damage and ESCRT-mediated lysosomal repair defects, are exacerbated in AD tNeurons and linked to inflammatory cytokine secretion and cell death. Providing support for the centrality of lysosomal deficits in AD, compounds ameliorating lysosomal function reduce amyloid β deposits and cytokine secretion. Thus, the tNeuron model system reveals impaired lysosomal homeostasis as an early event of ageing and AD.

Indexed as

Alzheimer DiseaseCell TransdifferentiationLysosomesNeuronsProteostasisAgingAmyloid beta-PeptidesAnimalsCells, CulturedCytokinesFibroblastsHumansMicetau ProteinsAmyloid beta-PeptidesCytokinestau Proteins

Identifiers

PMID40140603
PMCPMC11991917

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.