Evidence map›Paper›PMID 40139972›Full record

ArticleChemMedChem2025

Ligand Screening and Discovery Using Cocktail Soaking and Automated Microcrystal Electron Diffraction.

Jieye Lin, Marc J Gallenito, Johan Hattne, Tamir Gonen

Abstract read
In one paragraph

Article in ChemMedChem, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Membrane protein structure and dynamics probed by MicroED.Biochemical Society transactions · 2026
    Review
  2. Combining MicroED and native mass spectrometry for structural discovery of enzyme-small molecule complexes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Jieye LinDepartment of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, CA, 90095, USA.ORCID https://orcid.org/0009-0003-9008-5115
Marc J GallenitoDepartment of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, CA, 90095, USA.ORCID https://orcid.org/0000-0002-5096-724X
Johan HattneDepartment of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, CA, 90095, USA.ORCID https://orcid.org/0000-0002-8936-0912
Tamir GonenDepartment of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, CA, 90095, USA.ORCID https://orcid.org/0000-0002-9254-4069

Funding

TRD4: Design and Engineering of MicroED hardware for nanocrystallization and time resolved studiesP41GM136508 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GONEN, TAMIR · 2020 to 2024
$7.6M
Howard Hughes Medical InstituteNIGMS NIH HHS P41 GM136508NIH HHS P41GM136508U.S. Department of Defense MCDC-2202-002U.S. Government W15QKN-16-9-1002
6 · The paper itself

Abstract

Cocktail soaking using single-crystal X-ray diffraction previously allowed high-throughput crystallographic screening of ligands against protein targets. However, protein microcrystals are not amenable to this approach if they are too small to yield strong diffraction patterns. Herein, a workflow integrating cocktail soaking with automated microcrystal electron diffraction to allow rapid ligand screening, structure determination, and binding analysis directly from microcrystals is developed. This can improve the successful hit rate, because binding is often more efficient when smaller crystals are soaked in the ligand. The approach is validated with known ligands of thermolysin and identified novel binding interactions for ligands of proteinase K. The structures of multiple protein-ligand complexes, including ligands with weak binding affinities, can be solved rapidly. Their estimated relative binding affinities are in good agreement with previous work and independent microscale thermophoresis measurements.

Indexed as

Drug DiscoveryEndopeptidase KThermolysinCrystallography, X-RayElectronsLigandsMolecular StructureProtein BindingEndopeptidase KLigandsThermolysincocktail soakinghigh‐throughput data collectionligand screeningmicrocrystal electron diffractionmicroscale thermophoresis

Identifiers

PMID40139972
PMCPMC12174747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.