Evidence map›Paper›PMID 40139956›Full record

ReviewPhysiologia plantarum

The TPX family of co-repressors: a hub amidst the hubbub.

Benjamin Downing, Alexander R Leydon, Jennifer L Nemhauser

Abstract readReview
In one paragraph

Review in Physiologia plantarum. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. CONSERVATION AND DIVERGENCE WITHIN THEbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Benjamin DowningDepartment of Biology, University of Washington, Seattle, United States.ORCID https://orcid.org/0000-0002-6654-8947
Alexander R LeydonDepartment of Biology, University of Washington, Seattle, United States.
Jennifer L NemhauserDepartment of Biology, University of Washington, Seattle, United States.

Funding

Control of protein degradation and transcriptional dynamics in the auxin responseR35GM148135 · NIGMS · UNIVERSITY OF WASHINGTON · PI JENNIFER L NEMHAUSER · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM148135NIH HHS R35-GM148135University of Washington
6 · The paper itself

Abstract

The phytohormone auxin affects a wide range of plant responses through global shifts in gene expression. The TOPLESS/TOPLESS RELATED (TPL/TPR) co-repressors (here collectively called the TPX family for simplicity) play a central role in this transcriptional regulation, acting through a variety of mechanisms, including modifying chromatin accessibility and assembling the machinery needed for transcription initiation. Structure-function analysis has mapped multiple repression domains within the founding TPL protein, and uncovered several forms of post-translational modifications that alter the function of TPL or other TPX proteins. Recent examination of the AUXIN/INDOLE-3-ACETIC ACID (Aux/IAA) proteins suggests that differential affinity for TPXs can set the threshold for auxin sensitivity and subsequent growth dynamics. Beyond well-established roles in development, the TPX family has also emerged as a hub in plant immunity with effectors from diverse pathogens directly targeting TPX proteins. In one particularly striking case, a species of insect reduces the fitness of its competitors by manipulating TPX activity in the shared host plant to increase a selective suite of plant defenses. The subtle and effective reprogramming of critical developmental and immunity networks via modification of the pool of available TPX proteins could guide engineering strategies to optimize growth-defense trade-offs in crops. In this review, we will summarize recent studies highlighting how modifying the available pool of TPX family members results in subtle and effective reprogramming of critical developmental and immunity networks, and how this mode of regulation could provide a blueprint for optimizing growth-defense trade-offs in crops.

Indexed as

Co-Repressor ProteinsPlant ProteinsGene Expression Regulation, PlantIndoleacetic AcidsPlant Growth RegulatorsPlant ImmunityCo-Repressor ProteinsIndoleacetic AcidsPlant Growth RegulatorsPlant Proteins

Identifiers

PMID40139956
PMCPMC11978398

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.