Evidence map›Paper›PMID 40138719›Full record

ArticleNucleic acids research2025

DGCR8 haploinsufficiency leads to primate-specific RNA dysregulation and pluripotency defects.

Ana Colomer-Boronat, Lisanne I Knol, Guillermo Peris, Laura Sanchez, Silvia Peluso, Pablo Tristan-Ramos, Ana Gazquez-Gutierrez, Priscilla Chin, Katrina Gordon, Guillermo Barturen and 6 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Regulation of the microprocessor by post-translational modifications.Frontiers in cell and developmental biology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Ana Colomer-BoronatDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.
Lisanne I KnolInstitute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Guillermo PerisGENYO - Centre for Genomics and Oncological Research - Pfizer, University of Granada, Andalusian Regional Government, PTS, 18016 Granada, Spain.ORCID 0000-0003-2010-7844
Laura SanchezGENYO - Centre for Genomics and Oncological Research - Pfizer, University of Granada, Andalusian Regional Government, PTS, 18016 Granada, Spain.
Silvia PelusoMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, United Kingdom.
Pablo Tristan-RamosDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.
Ana Gazquez-GutierrezDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.
Priscilla ChinInstitute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Katrina GordonInstitute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Guillermo BarturenGENYO - Centre for Genomics and Oncological Research - Pfizer, University of Granada, Andalusian Regional Government, PTS, 18016 Granada, Spain.
Robert E HillMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, United Kingdom.
Francisco J Sanchez-LuqueInstitute of Parasitology and Biomedicine Lopez-Neyra (IPBLN), Spanish National Research Council (CSIC), PTS Granada, 18016 Granada, Spain.
Jose Luis Garcia-PerezGENYO - Centre for Genomics and Oncological Research - Pfizer, University of Granada, Andalusian Regional Government, PTS, 18016 Granada, Spain.
Alasdair IvensInstitute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Sara MaciasInstitute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Sara R HerasDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.ORCID 0000-0003-1677-7685

Funding

Agencia estatal de Investigación PRE2021-098878Consejería de Transformación Económica, Industria, Conocimiento y Universidades PY20_00619Darwin TrustESFEuropean Research Council ERC-STG-2012-309433FEDERGovernment of Spain SAF2017-89745-RJunta de Andalucia P12-CTS-2256Marie Curie FP7-PEOPLE-2011-CIG-303812Ministerio de Ciencia e Innovación PID2020-115033RB-I00MRCMs Francisca SerranoRoyal Society RGS\R1\191368Universidad de GranadaWellcome Trust 107665Wellcome Trust 221737Wellcome Trust 221737/Z/20/Z
6 · The paper itself

Abstract

The 22q11.2 deletion syndrome (22qDS) is a human disorder where the majority of clinical manifestations originate during embryonic development. 22qDS is caused by a microdeletion in one chromosome 22, including DGCR8, an essential gene for microRNA (miRNA) production. However, the impact of DGCR8 hemizygosity on human development is still unclear. In this study, we generated two human pluripotent cell models containing a single functional DGCR8 allele to elucidate its role in early development. DGCR8+/- human embryonic stem cells (hESCs) showed increased apoptosis as well as self-renewal and differentiation defects in both the naïve and primed states. The expression of primate-specific miRNAs was largely affected, due to impaired miRNA processing and chromatin accessibility. DGCR8+/- hESCs also displayed a pronounced reduction in human endogenous retrovirus class H (HERVH) expression, a primate-specific retroelement essential for pluripotency maintenance. The reintroduction of miRNAs belonging to the primate-specific C19MC cluster as well as the miR-371-3 cluster rescued the defects of DGCR8+/- cells. Mechanistically, downregulation of HERVH by depletion of primate-specific miRNAs was mediated by KLF4. Altogether, we show that DGCR8 is haploinsufficient in humans and that miRNAs and transposable elements may have co-evolved in primates as part of an essential regulatory network to maintain stem cell identity.

Indexed as

HaploinsufficiencyMicroRNAsPluripotent Stem CellsRNA-Binding ProteinsAnimalsApoptosisCell DifferentiationEndogenous RetrovirusesHuman Embryonic Stem CellsHumansKruppel-Like Factor 4PrimatesDGCR8 protein, humanKLF4 protein, humanKlf4 protein, mouseKruppel-Like Factor 4MicroRNAsRNA-Binding Proteins

Identifiers

PMID40138719
PMCPMC11941479

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.