Evidence map›Paper›PMID 40135776›Full record

ArticleClinical and translational gastroenterology2025

Characterization of Bile Microbiota in Patients With Obstructive Jaundice Associated With Biliary Tract Diseases.

Junxiong Wang, Qi Liu, Shangjia Jin, Boxing Yang, Chong Wang, Yuan Tan, Weimin Feng, Jingjin Tao, He Wang, Yongjun Wang and 2 more

Abstract read
In one paragraph

Article in Clinical and translational gastroenterology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Junxiong WangDepartment of Gastroenterology, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Qi LiuInstitute of Medical Technology, Peking University Health Science Center, Beijing, China.
Shangjia JinDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.
Boxing YangDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.
Chong WangDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.
Yuan TanInstitute of Medical Technology, Peking University Health Science Center, Beijing, China.
Weimin FengInstitute of Medical Technology, Peking University Health Science Center, Beijing, China.
Jingjin TaoInstitute of Medical Technology, Peking University Health Science Center, Beijing, China.
He WangDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.
Yongjun WangDepartment of Gastroenterology, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Shuo YangDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.
Liyan CuiDepartment of Clinical Laboratory, Peking University Third Hospital, Beijing, China.ORCID 0000-0003-1870-3997

Funding

National Natural Science Foundation of China, Key Clinical Specialty Funding Project of Beijin, Hospital-Enterprise Joint Funding Project, National Key Research and Development Program 62071011,81800604, 2023YFC2413802
6 · The paper itself

Abstract

introductionCholangiocarcinoma (CHOL), a malignant tumor of the biliary system, is particularly concerning because of its high malignancy and poor prognosis, often leading to obstructive jaundice. The advent of metagenomic next-generation sequencing technology has expanded diagnostic capabilities, including the identification of microbes within tumors and their potential role in cancer progression. The aims of this study were to explore the bacterial composition in bile from patients with obstructive jaundice of different etiologies and to investigate the association between bile microbiota and biochemical analytes, as well as their potential as biomarkers for diagnosis of obstructive jaundice diseases.

methodsBile samples from patients with obstructive jaundice admitted to Beijing Friendship Hospital were collected and subjected to 16S rRNA and metagenomic sequencing. The study included patients diagnosed with benign biliary stricture, gallstone, and CHOL. Clinical data and bile chemical components were analyzed. The potential functional roles of the identified microbiota were predicted using bioinformatics tools.

resultsThe study enrolled 13 patients with benign biliary stricture, 19 with gallstones, and 10 with CHOL. Significant differences in bile chemical components and microbial diversity were observed among the groups. The bile microbiota was dominated by distinct phyla and genera across the groups, with Proteobacteria and Fusobacteriota enriched in benign biliary stricture, Firmicutes and Desulfobacterota in CHOL, and Synergistota in patients with gallstone. Functional analysis revealed differences in gene functions related to metabolism and other biological processes. A correlation between bile microbiota and biochemical markers was established, and the combination of differential microbiota showed potential as a diagnostic marker for obstructive jaundice of different etiologies. DISCUSSION: Bile microbiota varies significantly among patients with obstructive jaundice of different etiologies. The identified microbial signatures and their functional roles could serve as novel diagnostic markers and provide insights into the pathogenesis of biliary diseases.

Indexed as

BacteriaBileBile Duct NeoplasmsCholangiocarcinomaGallstonesJaundice, ObstructiveMicrobiotaAdultAgedBiomarkersConstriction, PathologicFemaleHigh-Throughput Nucleotide SequencingHumansMaleMetagenomicsBiomarkersRNA, Ribosomal, 16Sbile microbiotabiomarkerscholangiocarcinomametagenomic sequencingobstructive jaundice

Identifiers

PMID40135776
PMCPMC12330354

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.