Evidence map›Paper›PMID 40134794›Full record

ArticlePHAGE (New Rochelle, N.Y.)2023

Comparative Genomics of

Albert C Vill, Véronique A Delesalle, Leigh H Magness, Brianne E Chaudhry, Katherine B Lichty, Madison S Strine, Alexandra A Guffey, Jenna M DeCurzio, Greg P Krukonis

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in PHAGE (New Rochelle, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Albert C VillDepartment of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut, USA.ORCID https://orcid.org/0000-0003-2437-5512
Véronique A DelesalleDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.ORCID https://orcid.org/0000-0003-2437-5512
Leigh H MagnessDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.ORCID https://orcid.org/0009-0001-6363-6255
Brianne E ChaudhryLGC Clinical Diagnostics, Gaithersburg, Maryland, USA.
Katherine B LichtyDepartment of Biological Sciences, University of Delaware, Newark, Delaware, USA.
Madison S StrineDepartment of Immunobiology, Yale School of Medicine, New Haven, Connecticut, USA.
Alexandra A GuffeyJanssen Scientific Affairs, LLC, Horsham, Pennsylvania, USA.
Jenna M DeCurzioResearch and Development, Montera, Inc., DBA Forta, San Francisco, California, USA.
Greg P KrukonisDepartment of Biology, Angelo State University, San Angelo, Texas, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Materials and Methods: Phages were isolated and purified on Results: Five phages were found to have high sequence similarity to each other and known phages, including phiNIT1. Annotation shows a conserved genome structure and protein families unique to this group. Repeated sequences are concentrated in intergenic regions at the ends of the genomes. Capsid structure and tail length suggest these phages are myoviruses. Conclusions: The phages described here share sequence similarity and genomic structure with known

Indexed as

Bacillus subtiliscomparative genomicsfunctional annotationintergenic repeated sequences

Identifiers

PMID40134794
PMCPMC11932518

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.