Evidence map›Paper›PMID 40131520›Full record

ArticleCurrent microbiology2025

Whole-Genome Sequence Reveals Genetic Determinants of the Colonization of Shiga Toxin-Producing Escherichia coli O22:H8 Isolates in Cattle.

Wanderson Marques Da Silva, Libia Yael Smith, Flavia Figueira Aburjaile, Mariano Larzabal, Sandy Ingrid Aguiar Alves, Pablo Farace, Carlos Willian Dantas, Mateus Matiuzzi Costa, Bertram Brenig, Rommel Thiago Jucá Ramos and 2 more

Abstract read
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Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Comparative genomics of Shiga toxin-producingFrontiers in veterinary science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Wanderson Marques Da SilvaAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, Buenos Aires, Argentina. wanderson.marques1@gmail.com.
Libia Yael SmithAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, Buenos Aires, Argentina.
Flavia Figueira AburjailePreventive Veterinary Medicine Departament, Veterinary School, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Mariano LarzabalAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, Buenos Aires, Argentina.
Sandy Ingrid Aguiar AlvesSimulation and Computational Biology Laboratory, Federal University of Pará, Belém, Pará, Brazil.
Pablo FaraceAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, Buenos Aires, Argentina.
Carlos Willian DantasInstitute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Mateus Matiuzzi CostaDepartment of Biological Sciences, Federal University of Vale do São Francisco, Petrolina, Recife, Brazil.
Bertram BrenigDepartment of Molecular Biology of Livestock, Institute of Veterinary Medicine, Georg-August-University Göttingen, Göttingen, Germany.
Rommel Thiago Jucá RamosSimulation and Computational Biology Laboratory, Federal University of Pará, Belém, Pará, Brazil.
Vasco AzevedoInstitute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Angel CataldiAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, Buenos Aires, Argentina.

Funding

Fondo para la Investigación Científica y Tecnológica PICT 2020-01275Fondo para la Investigación Científica y Tecnológica PICT 2021-0490
6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli (STEC) is a zoonotic foodborne pathogen responsible for different cases and outbreaks of severe enteric diseases in humans worldwide. Our group previously showed that Argentine O22:H8 isolates (155 and 182) interfere with the colonization of O157:H7 in an experimental infection bovine model. In this study, we applied a comparative genomic and genome-wide association study (GWAS) analysis to explore the differences between the genetic bases of O22:H8 and O157:H7 strains isolated from cattle. The whole-genome sequence of O22:H8 155 and 182 isolates was compared with 33 O22:H8 and 156 O157:H7 isolates from bovine. Our results showed that O22:H8 isolates harbor genes associated with specific metabolic pathways related to the metabolism of products of vegetal origin, which are absent in O157:H7 isolates. These O22:H8 isolates also carry classical genes of the locus of adhesion and autoaggregation related to the adhesion of non-O157 isolates. In addition, we showed that the T6SS-1 cluster related to bacterial competition predicted in the Argentine O22:H8 isolates is absent both in O157:H7 and other O22:H8 isolates. We also predicted for the first time the locus of type VI secretion system 1 (LT6SS-T1), a genomic island that harbors both T6SS-1 cluster genes and genes related to STEC pathogenesis. This study reveals a subset of genes present in the Argentine O22:H8 isolates that could confer an advantage over O157:H7 during the colonization process in the bovine intestinal tract.

Indexed as

Cattle DiseasesEscherichia coli InfectionsGenome, BacterialShiga-Toxigenic Escherichia coliAnimalsCattleEscherichia coli O157Escherichia coli ProteinsGenome-Wide Association StudyVirulence FactorsWhole Genome SequencingEscherichia coli ProteinsVirulence Factors

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.