Evidence map›Paper›PMID 40122595›Full record

ArticleGut2025

Longitudinal paired liver biopsies and transcriptome profiling in alcohol-associated hepatitis reveal dynamic changes in cellular senescence.

Daniel Rodrigo-Torres, Alastair M Kilpatrick, Sofia Ferreira-Gonzalez, Rhona E Aird, Stephen Rahul Atkinson, Victoria L Gadd, Tak Yung Man, Luke D Tyson, Gopal Krishna R Dhondalay, Nikhil Vergis and 4 more

Abstract read
In one paragraph

Article in Gut, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Daniel Rodrigo-TorresCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0001-7840-1523
Alastair M KilpatrickCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-4795-8799
Sofia Ferreira-GonzalezCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0001-7776-287X
Rhona E AirdCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-1014-8063
Stephen Rahul AtkinsonDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.
Victoria L GaddCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.
Tak Yung ManCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-8452-2417
Luke D TysonDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.ORCID 0000-0003-2745-0282
Gopal Krishna R DhondalayDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.ORCID 0000-0002-1020-0175
Nikhil VergisDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.ORCID 0000-0002-4157-6757
Gavin E ArteelDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.ORCID 0000-0002-2253-5984
Mark R ThurszDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.
Laura Martinez-GiliDivision of Digestive Diseases, Department of Metabolism Digestion and Reproduction, Imperial College London, London, UK.ORCID 0000-0001-5271-9672
Stuart J ForbesCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, UK stuart.forbes@ed.ac.uk.ORCID 0000-0003-3715-2561

Funding

Pittsburgh Liver Research CenterP30DK120531 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVID A GELLER · 2019 to 2026
$10.9M
Biomarkers of Alcoholic HepatitisR01AA028436 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, BENOS, PANAGIOTIS V · 2020 to 2024
$3.0M
The role of matrix-bound microvesicles in alcohol-related liver diseaseR01AA030007 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Gavin E Arteel, Melanie J. Scott · 2023 to 2026
$2.0M
NIAAA NIH HHS R01 AA028436NIAAA NIH HHS R01 AA030007NIDDK NIH HHS P30 DK120531
6 · The paper itself

Abstract

BACKGROUND AND

aimsAlcohol-associated hepatitis (AH) is an acute form of alcohol-related liver disease (ALD) with high mortality rate. AH is histologically characterised by cellular processes, including steatosis, inflammation and cell death. Apoptosis is the most studied form of cell death in AH; however, the role of cellular senescence, another response to cellular injury, in AH is unknown. Here, we explore the mechanisms of ALD pathophysiology and describe the role of senescence in AH.

methodsWe performed RNA sequencing and bioinformatics analysis of 0- and 28-day transjugular liver biopsies (n=65) from patients with AH participating in the IL-1 Signal Inhibition In Alcoholic Hepatitis (ISAIAH) clinical trial. Additional bioinformatics reanalysis of existing AH transcriptomic datasets was conducted to confirm our findings. We also performed multiomic analysis of an in vitro model of AH with ethanol-treated hepatocytes overexpressing ethanol-metabolising enzymes.

resultsOur longitudinal analysis revealed that senescence and inflammation were reduced at transcriptomic level following AH resolution; the expression of hepatocyte markers was increased. We identified two senescence-associated protein complexes, cytochrome c oxidase and the proteasome, which may act as senescence-induction mechanisms. We confirmed that senescence markers and pathways were increasingly expressed in hepatocytes as ALD progressed towards AH; this was partially reversed following AH resolution. Our in vitro model revealed that ethanol directly induces senescence and was dependent on ethanol metabolism.

conclusionsOur results suggest a possible pathogenic role for senescence in AH and indicate cellular senescence as a potential therapeutic target in early ALD to limit AH severity.

Indexed as

Cellular SenescenceHepatitis, AlcoholicLiverAdultBiopsyEthanolFemaleGene Expression ProfilingHepatocytesHumansLongitudinal StudiesMaleMiddle AgedTranscriptomeEthanolALCOHOLIC LIVER DISEASEETHANOLINFLAMMATIONLIVER REGENERATION

Identifiers

PMID40122595
PMCPMC12331437

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.