Evidence map›Paper›PMID 40119899›Full record

ArticleImmunogenetics2025

Phylogenetic and structural insights into the origin of C-type lectin Mincle in vertebrates.

Taiki Ito, Carla Guenther, Eri Ishikawa, Takae Yabuki, Masamichi Nagae, Yoichiro Nakatani, Sho Yamasaki

Abstract read
In one paragraph

Article in Immunogenetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Taiki ItoDepartment of Molecular Immunology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.ORCID http://orcid.org/0000-0002-1408-7288
Carla GuentherLaboratory of Molecular Immunology, Immunology Frontier Research Center (IFReC), Osaka University, Suita, Osaka, Japan.ORCID http://orcid.org/0000-0001-7915-1028
Eri IshikawaDepartment of Molecular Immunology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.ORCID http://orcid.org/0000-0002-4922-6751
Takae YabukiDepartment of Molecular Immunology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Masamichi NagaeDepartment of Molecular Immunology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.ORCID http://orcid.org/0000-0002-5470-3807
Yoichiro NakataniLaboratory of Medical and Evolutionary Genomics, Department of Biological Informatics, Bioinformatics Center, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan. nakatani@biken.osaka-u.ac.jp.ORCID http://orcid.org/0000-0001-7604-0242
Sho YamasakiDepartment of Molecular Immunology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan. yamasaki@biken.osaka-u.ac.jp.ORCID http://orcid.org/0000-0002-5184-6917

Funding

Japan Agency for Medical Research and Development JP23K14541Japan Science and Technology Agency JPMJSP2138Japan Society for the Promotion of Science JP22H05183Japan Society for the Promotion of Science JP23H00403Kishimoto Foundation CG
6 · The paper itself

Abstract

Our bodies are continuously exposed to injurious insults by infection and tissue damage, which are primarily sensed by innate immune receptors to maintain homeostasis. Among such receptors is macrophage-inducible C-type lectin (Mincle, gene symbol CLEC4E), a member of the C-type lectin receptor (CLR) family, which functions as an immune sensor for both pathogens and damaged self. To monitor these injurious stimuli, Mincle recognizes disaccharide-based pathogen-derived glycolipids and monosaccharide-based intracellular metabolites, such as β-glucosylceramide. Mincle is well-conserved among mammals; however, there are questions that remain unclear, such as from which lower vertebrate did it arise and whether the original ligand was self or non-self. Here, we found homologues of Mincle and its signaling subunit Fc receptor γ chain (FcRγ) in lower vertebrates, such as reptiles, amphibians, and fishes. The crystal structure of a Mincle homologue revealed that fish Mincle possesses a narrower sugar-binding pocket than that of mammalian Mincle, and accommodates only monosaccharide moieties. These results suggest that Mincle may have evolved from a self-recognizing receptor, and its sugar-binding pocket widened during evolution, presumably to adapt to disaccharide-based glycolipids derived from life-threatening pathogens.

Indexed as

Lectins, C-TypePhylogenyVertebratesAmino Acid SequenceAnimalsEvolution, MolecularHumansImmunity, InnateModels, MolecularLectins, C-TypeCrystal structureC-type lectin receptorsFcRγLigand specificityMolecular phylogeneticsVertebrates

Identifiers

PMID40119899
PMCPMC11929736

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.