Evidence map›Paper›PMID 40119004›Full record

ReviewNature protocols2025

DARLIN mouse for in vivo lineage tracing at high efficiency and clonal diversity.

Li Li, Sarah Bowling, Hongying Lin, Daolong Chen, Shou-Wen Wang, Fernando D Camargo

Abstract readReview
In one paragraph

Review in Nature protocols, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Li Li *Westlake Laboratory of Life Sciences and Biomedicine, Hangzhou, China.
Sarah Bowling *Department of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Hongying LinSchool of Life Sciences, Westlake University, Hangzhou, China.
Daolong ChenWestlake Laboratory of Life Sciences and Biomedicine, Hangzhou, China.
Shou-Wen WangWestlake Laboratory of Life Sciences and Biomedicine, Hangzhou, China. wangshouwen@westlake.edu.cn.ORCID 0000-0003-4569-1194
Fernando D CamargoStem Cell Program, Boston Children's Hospital, Boston, MA, USA. Fernando.Camargo@childrens.harvard.edu.ORCID 0000-0002-5630-5909

Funding

Molecular regulation of native hematopoiesisR01HL128850 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI CAMARGO, FERNANDO · 2016 to 2024
$4.9M
Generation of a temporal, spatial, and molecular map of in situ hematopoiesisRC2DK131963 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI Fernando Camargo, Charles P. Lin · 2022 to 2026
$4.8M
High resolution lineage tracing of developmental hematopoiesisR01HL158192 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI Fernando Camargo, Sahand Hormoz · 2023 to 2026
$3.0M
Cellular barcoding of developmental hematopoiesisK99HL164969 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI BOWLING, SARAH · 2022 to 2023
$308k
National Science Foundation of China | National Natural Science Foundation of China-Yunnan Joint Fund (NSFC-Yunnan Joint Fund) 32470700NHLBI NIH HHS K99 HL164969NHLBI NIH HHS R01 HL128850NHLBI NIH HHS R01 HL158192NIDDK NIH HHS RC2 DK131963
6 · The paper itself

Abstract

Lineage tracing is a powerful tool to study cell history and cell dynamics during tissue development and homeostasis. An increasingly popular approach for lineage tracing is to generate high-frequent mutations at given genomic loci, which can serve as genetic barcodes to label different cell lineages. However, current lineage tracing mouse models suffer from low barcode diversity and limited single-cell lineage coverage. We recently developed the DARLIN mouse model by incorporating three barcoding arrays within defined genomic loci and combining Cas9 and terminal deoxynucleotidyl transferase (TdT) to improve editing diversity in each barcode array. We estimated that DARLIN generates 10

Indexed as

Cell LineageDNA Barcoding, TaxonomicAnimalsCRISPR-Cas SystemsGene EditingMiceSingle-Cell Analysis

Identifiers

PMID40119004
PMCPMC13579657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.