Evidence map›Paper›PMID 40117529›Full record

ArticleJCO precision oncology2025

Genomic Characterization of Chondrosarcoma Reveals Potential Therapeutic Targets.

Michael J Wagner, Erica M Pimenta, Nathan W Sweeney, Elizabeth T Loggers, Jesse L Roberts, Elyse Brinkman, Eleanor Y Chen, Robert Ricciotti, Candace L Haddox, Rachel Berg and 4 more

Abstract read
In one paragraph

Article in JCO precision oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Clinical advancement in the management of mutant isocitrate dehydrogenase (EJC supplements : EJC : official journal of EORTC, European Organization for Research and Treatment of Cancer ... [et al.] · 2026
    Article
  7. Isocitrate dehydrogenase mutations as potential tumour agnostic targets.EJC supplements : EJC : official journal of EORTC, European Organization for Research and Treatment of Cancer ... [et al.] · 2026
    Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Michael J WagnerSarcoma and Bone Cancer Center, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-0753-9282
Erica M PimentaSarcoma and Bone Cancer Center, Dana-Farber Cancer Institute, Boston, MA.
Nathan W SweeneyTempus AI, Inc, Chicago, IL.ORCID 0000-0002-2317-6207
Elizabeth T LoggersMedical Oncology, University of Washington, Seattle, WA.ORCID 0000-0003-3432-0443
Jesse L RobertsClinical Research Division, Fred Hutchinson Cancer Center, Seattle, WA.ORCID 0009-0008-9139-2455
Elyse BrinkmanClinical Research Division, Fred Hutchinson Cancer Center, Seattle, WA.ORCID 0000-0002-4489-8321
Eleanor Y ChenDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, WA.
Robert RicciottiDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, WA.
Candace L HaddoxSarcoma and Bone Cancer Center, Dana-Farber Cancer Institute, Boston, MA.
Rachel BergTempus AI, Inc, Chicago, IL.ORCID 0009-0009-4951-1649
Binyam YilmaTempus AI, Inc, Chicago, IL.ORCID 0009-0007-8845-5390
Melissa C StopplerTempus AI, Inc, Chicago, IL.
James L ChenTempus AI, Inc, Chicago, IL.ORCID 0000-0002-4095-5202
Lee D CranmerMedical Oncology, University of Washington, Seattle, WA.ORCID 0000-0002-7789-5442

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeChondrosarcomas are rare cancers of cartilage with limited systemic therapy options. To identify potential therapeutic targets, this study investigated the molecular and immune landscape of three chondrosarcoma subtypes using a large database of clinical-grade sequencing results.

methodsDeidentified records from patients with a histologic diagnosis of conventional, dedifferentiated, or mesenchymal chondrosarcoma sequenced by the Tempus xT DNA assay were included. Microsatellite instability (MSI) and tumor mutational burden (TMB) were determined from sequencing data. The expression of PD-L1 and mismatch repair enzymes was evaluated in cases with available immunohistochemistry (IHC) data.

resultsOf the 149 patients, 103 had conventional chondrosarcoma, 31 dedifferentiated chondrosarcoma, and 15 mesenchymal chondrosarcoma. Across the cohort, 44% (n = 65) had an

conclusionThese findings reinforce therapeutic efforts to target IDH signaling in chondrosarcoma, provide insight into varied subpopulation response to immune checkpoint inhibitors, and identify new potential therapeutic targets for clinical development in chondrosarcoma.

Indexed as

Bone NeoplasmsChondrosarcomaAdultAgedAged, 80 and overB7-H1 AntigenChondrosarcoma, MesenchymalFemaleGenomicsHumansIsocitrate DehydrogenaseMaleMicrosatellite InstabilityMiddle AgedMutationYoung AdultB7-H1 AntigenCD274 protein, humanIDH1 protein, humanIsocitrate Dehydrogenase

Identifiers

PMID40117529
PMCPMC11949235

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.