Evidence map›Paper›PMID 40116817›Full record

ArticleJournal of chemical theory and computation2025

Acceleration of the Relativistic Dirac-Kohn-Sham Method with GPU: A Pre-Exascale Implementation of BERTHA and PyBERTHA.

Loriano Storchi, Laura Bellentani, Jeff Hammond, Sergio Orlandini, Leonardo Pacifici, Nicoló Antonini, Leonardo Belpassi

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Loriano StorchiDipartimento di Farmacia, Università G. d'Annunzio Chieti-Pescara, via dei Vestini 31, 66100 Chieti, Italy.ORCID 0000-0001-5021-7759
Laura BellentaniCINECA, Via dei Tizi 6/b, 00185 Roma, RM, Italy.
Jeff HammondNVIDIA Helsinki Oy, 00180 Helsinki, Finland.
Sergio OrlandiniCINECA, Via dei Tizi 6/b, 00185 Roma, RM, Italy.
Leonardo PacificiCNR Institute of Chemical Science and Technologies "Giulio Natta" (CNR-SCITEC), via Elce di Sotto 8, 06123 Perugia, Italy.
Nicoló AntoniniDipartimento di Farmacia, Università G. d'Annunzio Chieti-Pescara, via dei Vestini 31, 66100 Chieti, Italy.
Leonardo BelpassiCNR Institute of Chemical Science and Technologies "Giulio Natta" (CNR-SCITEC), via Elce di Sotto 8, 06123 Perugia, Italy.ORCID 0000-0002-2888-4990

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this paper, we present the recent advances in the computation of the Dirac-Kohn-Sham (DKS) method of the BERTHA code. We show here that the simple underlined structure of the FORTRAN code also favors efficient porting of the code to GPUs, leading to a particularly efficient hybrid CPU/GPU implementation (OpenMP/OpenACC), where the most computationally intensive part for DKS matrix evaluation (three-center two-electron integrals evaluated via the McMurchie-Davidson scheme) is efficiently offloaded to the GPU via compiler directives based on the OpenACC programming model. This scheme in combination with the use of a linear algebra library optimized for GPUs (cuBLAS, cuSOLVER) significantly accelerates the DKS calculations. In addition, the low-level integral kernel developed here at FORTRAN level was used to port our real-time DKS (RT-TDDKS) implementation based on Python (PyBERTHART) for the utilization of the GPU. The results obtained on the new Tier-0 EuroHPC supercomputer (LEONARDO) of the CINECA Supercomputing Centre with a single NVIDIA A100 card are very satisfactory. We achieve a speedup up to 30 for Au

Identifiers

PMID40116817
PMCPMC11983715

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.