Evidence map›Paper›PMID 40116173›Full record

ArticleThe Journal of experimental biology2025

Gene expression and enzyme activity analysis of carbohydrate digestion in Strongylocentrotus purpuratus larvae.

Jasper Hildebrand, Meike Stumpp

Abstract read
In one paragraph

Article in The Journal of experimental biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jasper HildebrandZoological Institute, Christian-Albrechts University of Kiel, 24118 Kiel, Germany.ORCID 0000-0002-7467-6236
Meike StumppZoological Institute, Christian-Albrechts University of Kiel, 24118 Kiel, Germany.ORCID 0000-0001-7765-2996

Funding

Christian Albrechts Universität zu KielDeutsche ForschungsgemeinschaftDeutsche Forschungsgemeinschaft 441084746
6 · The paper itself

Abstract

Carbohydrates play multifaceted roles in marine ecosystems, serving as structural components in algae, energy storage molecules and vital nutrients for marine organisms. The purple sea urchin, Strongylocentrotus purpuratus, undergoes metamorphosis during ontogeny, transitioning its feeding strategy from microalgae to macroalgae as the primary food source. However, the digestive mechanisms underlying carbohydrate digestion in sea urchin larvae remain poorly understood. We investigated the carbohydrate digestion capabilities of S. purpuratus larvae, using expression-level analysis of candidate genes putatively involved in carbohydrate digestion, quantification of enzyme activity, and pH and temperature optima characterization for the digestion of starch, laminarin, cellulose, xylan and trehalose. Transcriptomic analyses revealed the expression of genes encoding putative carbohydrate-degrading enzymes during early larval development. RT-qPCR demonstrated age- and/or feeding-dependent expression patterns of glycosidase candidate genes β-1,3-glucanase (laminarinase), α-amylase, endo-β-1,4-glucanase D-like (cellulase), xylanase/β-glucanase-like and trehalase. Furthermore, enzymatic assays elucidated differential temporal patterns, and thermal and pH optima of associated carbohydrate-degrading enzymes. A comparison of the enzymatic degradation of five substrates demonstrated that laminarinase activity was five times higher than the activity of enzymes involved in digesting starch, cellulose, xylan and trehalose, leading to a hypothesis regarding the importance of laminarin for larval growth.

Indexed as

Carbohydrate MetabolismStrongylocentrotus purpuratusAnimalsDigestionLarvaTranscriptomeAmylaseCelluloseDigestive enzymesGlycosidasesLaminarinSea urchinTrehaloseXylan

Identifiers

PMID40116173
PMCPMC12079659

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.