Evidence map›Paper›PMID 40115680›Full record

ArticleCureus2025

Mapping Viral Landscapes: Genomic Surveillance of Aedes Mosquitoes From Central India.

Chitra Patankar, Umay Kulsum, Shruti Mahajan, Sudhir Kumar, Dipesh Kale, Vineet K Sharma, Shashwati Nema, Debasis Biswas

Abstract read
In one paragraph

Article in Cureus, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chitra PatankarMicrobiology, All India Institute of Medical Sciences, Bhopal, Bhopal, IND.
Umay KulsumMicrobiology, All India Institute of Medical Sciences, Bhopal, Bhopal, IND.
Shruti MahajanBiological Sciences, Indian Institute of Science Education and Research, Bhopal, Bhopal, IND.
Sudhir KumarBiological Sciences, Indian Institute of Science Education and Research. Bhopal, Bhopal, IND.
Dipesh KaleMicrobiology, All India Institute of Medical Sciences, Bhopal, Bhopal, IND.
Vineet K SharmaBiological Sciences, Indian Institute of Science Education and Research, Bhopal, Bhopal, IND.
Shashwati NemaMicrobiology, All India Institute of Medical Sciences, Bhopal, Bhopal, IND.
Debasis BiswasMicrobiology, All India Institute of Medical Sciences, Bhopal, Bhopal, IND.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMosquito-borne viral diseases pose a significant impact on human health, with the potential to cause widespread outbreaks of diseases. Monitoring viral genomes in mosquito populations can lead to informed risk assessment and promote early diagnosis. However, a standardized methodology is lacking to decipher circulating viral sequences in mosquito populations collected from human habitats. Our study aims to establish and evaluate a system of viral metagenomic analysis in the

methodsMosquitoes were collected using CDC-approved BG-Sentinel version 2 traps (Biogents AG, Regensburg, Germany) and battery-operated vacuum aspirators from different locations in the Bhopal region, India. They were sorted based on genus, gender, location, and collection date. The RNA was extracted from the homogenized mosquito pools and reverse transcribed. Complementary DNA (cDNA) was amplified using sequence-independent, single-prime amplification (SISPA). Further, polymerase chain reaction (PCR) products were sequenced using the Illumina NovaSeq 6000 platform (Illumina, Inc., San Diego, CA). Bioinformatic analysis of the reads was performed using Trimmomatic (Bolger AM, Lohse M, Usadel B (2014). Trimmomatic: A flexible trimmer for Illumina Sequence Data (Bioinformatics, btu170) for trimming low-quality raw reads. Later, Kraken2 and Bracken (Johns Hopkins University, Baltimore, MD) were used for the identification of viral sequences.

resultsThe study examined virus diversity and seasonal distribution in mosquito populations collected from 13 sites in Bhopal, India, over 15 months. A total of 31 mosquito pools of female

conclusionsOur findings demonstrate the potential of combining entomological and genomic surveillance for monitoring virus circulation in mosquito populations, which may be implemented as a routine surveillance tool for the timely detection of spikes in viruses with human pathogenic potential and thus inform targeted vector control measures to avert potential outbreaks in the future.

Indexed as

mosquito metagenomenext generation sequencingvector-borne diseaseviral surveillancevirome analyses

Identifiers

PMID40115680
PMCPMC11924139

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.