Evidence map›Paper›PMID 40114844›Full record

ArticleTranslational andrology and urology2025

Exploration of a prognostic signature for mitochondria-related genes and the therapeutic prospects of vorinostat in clear cell renal cell carcinoma.

Wenhui Li, Huan Pan, Bangwei Zhou, Yifang Cao, Bin Shen, Nan Li, Yao Zhang, Yi He, Jing Jin, Lili Shi and 1 more

Abstract read
In one paragraph

Article in Translational andrology and urology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Wenhui Li *Department of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Huan Pan *Department of Central Laboratory, The Affiliated Hospital of Jiaxing University, Jiaxing, China.
Bangwei Zhou *Department of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Yifang CaoDepartment of Urology, The Affiliated Hospital of Jiaxing University, Jiaxing, China.
Bin ShenDepartment of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Nan LiDepartment of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Yao ZhangDepartment of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Yi HeDepartment of Urology, The Affiliated Hospital of Jiaxing University, Jiaxing, China.
Jing JinDepartment of Urology, The Affiliated Hospital of Jiaxing University, Jiaxing, China.
Lili ShiDepartment of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.
Jinlai GaoDepartment of Pharmacology, College of Medical, Jiaxing University, Jiaxing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Clear cell renal cell carcinoma (ccRCC) is a lethal urological cancer that accounts for a considerable portion of all malignant tumors in adults. Alterations in mitochondrial function and metabolism may influence the onset and progression of ccRCC. This study aims to develop a novel clinical prognostic signature for ccRCC based on mitochondria-associated genes, as well as to identify new potential therapeutic agents for this condition. Methods: A total of 539 ccRCC tumors and 72 normal kidney specimens were analyzed from The Cancer Genome Atlas (TCGA). We created a prognostic signature based on univariate, multivariate Cox, and least absolute shrinkage and selection operator (LASSO) Cox regression. A differential expression analysis, functional enrichment, and assessment of tumor immune cell infiltration were performed. Connectivity Map (CMap) and L1000CDS Results: The prognostic signature, comprising 16 mitochondria-related genes, demonstrated marked changes in overall survival between high- and low-risk groups. Functional analysis implicated immune-related pathways, indicating potential for immunotherapy strategies. Vorinostat, identified through drug screening, exhibited inhibitory implications on ccRCC cell proliferation, migration, and invasion and induced cell death. Conclusions: The constructed prognostic signature provides a valuable tool for patient prognosis prediction. Vorinostat emerges as a promising therapeutic candidate for high-risk ccRCC patients, contributing to a deeper understanding of ccRCC biology and personalized therapeutic interventions.

Indexed as

Clear cell renal cell carcinoma (ccRCC)mitochondriaprognostic signaturevorinostat

Identifiers

PMID40114844
PMCPMC11921268

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.