Evidence map›Paper›PMID 40114810›Full record

ReviewPHAGE (New Rochelle, N.Y.)2024

Between Centralization and Fragmentation: The Past, Present, and Future of Phage Collections.

Grégory Resch, Charlotte Brives, Laurent Debarbieux, Francesca E Hodges, Claas Kirchhelle, Frédéric Laurent, Sylvain Moineau, Ana Filipa Moreira Martins, Christine Rohde

Abstract readReview
In one paragraph

Review in PHAGE (New Rochelle, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Grégory ReschLaboratory of Bacteriophages and Phage Therapy, Center for Research and Innovation in Clinical Pharmaceutical Sciences (CRISP), Lausanne University Hospital (CHUV), Lausanne, Switzerland.
Charlotte BrivesSociology Faculty, Emile Durkheim Center, CNRS, Bordeau France.
Laurent DebarbieuxInstitut Pasteur, Université Paris Cité, CNRS UMR6047, Bacteriophage, Bacterium, Host, Paris, France.
Francesca E HodgesInnovate UK, KTN, Business Design Centre, London, United Kingdom.
Claas KirchhelleSchool of History, University College Dublin, Dublin, Ireland.
Frédéric LaurentLaboratoire de Bactériologie, Institut des Agents Infectieux, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France.
Sylvain MoineauInstitut de Biologie Intégrative et des Systèmes (IBIS), Pavillon Charles-Eugène-Marchand, Université Laval, Quebec City, Canada.
Ana Filipa Moreira MartinsDSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Department Bioresources for Bioeconomy and Health Research, Leibniz Institute, Braunschweig, Germany.
Christine RohdeDSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Department Bioresources for Bioeconomy and Health Research, Leibniz Institute, Braunschweig, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite over a century of collecting bacteriophages, there has been a persistent lack of interest in systematically cataloging resulting phage banks. The result was a situation in which the ongoing growth of phage infrastructures was paralleled by an increasing fragmentation of knowledge about collections' contents and existence. Over the last two decades, renewed interest in phage therapy and phage biology has further exacerbated confusion amid a rapid increase in the number of large and small phage collections and an ongoing dearth of coordination and standardized cataloging. Whatever the modalities (isolated phages or genomes), the time has undoubtedly come to create sustainable, interconnected, and equitable phage banking infrastructures. This article reviews both the history and current status of microbial collections, provides a nonexhaustive overview of relevant phage collections, and reflects on the challenges and potential of centralizing therapeutically relevant collections ahead of likely paradigm shifts caused by synthetic biology and artificial intelligence.

Indexed as

bacteriophagescataloguingcentralizationmicrobial culture collectionsphage banks

Identifiers

PMID40114810
PMCPMC11920704

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.