ArticleScientific data2025
Telomere-to-telomere reference genome of Rhinogobio nasutus, an endangered endemic fish from the Yellow River.
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- The first telomere-to-telomere genome assembly of a freshwater bivalve: Gibbosula rochechouartii.Scientific data · 2026Article
- A chromosome-level genome assembly of Hemibarbus maculatus.Scientific data · 2026Article
- Near telomere to telomere genome assembly of Chinese yellow rabbit (Oryctolagus cuniculus).Scientific data · 2025Article
- Article
- Telomere-to-telomere reference genome of Rhinogobio nasutus, an endangered endemic fish from the Yellow River.Scientific data · 2025Article
- The telomere-to-telomere gapless genome of grass carp provides insights for genetic improvement.GigaScience · 2025Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Rhinogobio nasutus is an endemic fish species native to the middle and upper reaches of the Yellow River in China, renowned for its high economic and nutritional value. However, due to overfishing, human activities, and environmental pollution, it is now critically endangered. This study presents the construction of a telomere-to-telomere (T2T) reference genome for R. nasutus by integrating PacBio HiFi reads, Oxford Nanopore Technologies and Hi-C data. The assembled genome has a total size of 953.38 Mb and is anchored to 25 autosomes. Multiple assessments confirmed the high quality of the genome in terms of mapping rate (99.77% and 99.85%), completeness (BUSCO: 99.31%), and accuracy (QV: 47.05 and 53.10). Functional annotation was achieved for 98.16% of the 24,677 protein-coding genes, with a BUSCO score of 99.81%. This work not only facilitates the genetic conservation of R. nasutus but also provides a valuable resource for related evolutionary studies.
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