Evidence map›Paper›PMID 40113624›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2025

Genome-wide association study reveals genetic loci for seed density per silique in rapeseed (Brassica napus L.).

Youjuan Quan, Haidong Liu, Kaixiang Li, Liang Xu, Zhigang Zhao, Lu Xiao, Yanmei Yao, Dezhi Du

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Youjuan QuanLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Haidong LiuLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China. dahaima@163.com.
Kaixiang LiLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Liang XuLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Zhigang ZhaoLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Lu XiaoLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Yanmei YaoLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China.
Dezhi DuLaboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Qinghai Spring Rape Engineering Research Center, Qinghai Research Branch of the National Oil Crop Genetic Improvement Center, Spring Rape Scientific Observation Experimental Station of Ministry of Agriculture and Rural Areas, Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, 810016, Qinghai, China. qhurape@126.com.ORCID http://orcid.org/0000-0002-5505-0094

Funding

Earmarked Fund for China Agriculture Research System CRAS-12High-level Hospital Construction Project of Guangdong Provincial People's Hospital 2022-NK-170
6 · The paper itself

Abstract

key messageTwo stable QTLs controlling seed density per silique were detected on chromosomes A09 and C05 in rapeseed via GWAS, and ARF18 was the only causal gene of QTL qSDPS-A09. Seed density per silique (SDPS) is a key agronomic trait that directly or indirectly affects seed yield in rapeseed (Brassica napus L.). Exploring the genetic control of SDPS is beneficial for increasing rapeseed production. In this study, we evaluated the SDPS phenotypes of 413 rapeseed cultivars (lines) across five natural environments and genotyped them by resequencing. A GWAS analysis was performed using 5,277,554 high-quality variants with the MLM_PCA + K and FarmCPU models. A total of 51 loci were identified to be significantly (p < - log

Indexed as

Brassica napusQuantitative Trait LociSeedsChromosome MappingChromosomes, PlantGenome-Wide Association StudyGenotypePhenotypePolymorphism, Single Nucleotide

Identifiers

PMID40113624

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.