Evidence map›Paper›PMID 40111401›Full record

ArticleThe Journal of general virology2025

NEDD4-binding protein 1 suppresses hepatitis B virus replication by regulating viral RNAs.

Nobuhiro Kobayashi, Saori Suzuki, Yuki Sakamoto, Rigel Suzuki, Kento Mori, Yume Kosugi, Tomoya Saito, Yuan Ma, Lihan Liang, Takuma Izumi and 12 more

Abstract read
In one paragraph

Article in The Journal of general virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Nobuhiro KobayashiDepartment of Gastroenterological Surgery 1, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Saori SuzukiDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Yuki SakamotoDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Rigel SuzukiDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Kento MoriDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Yume KosugiDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Tomoya SaitoDepartment of Gastroenterological Surgery 1, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Yuan MaDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Lihan LiangDepartment of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Takuma IzumiDepartment of Surgery, Matsuyama Red Cross Hospital, Ehime, Japan.
Kisho NodaTokyo Bay Urayasu Ichikawa Medical Center, Chiba, Japan.
Daisuke OkuzakiGenome Information Research Center, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Yumi KanegaeCore Research Facilities, Research Center for Medical Sciences, The Jikei University School of Medicine, Tokyo, Japan.
Sanae HayashiDepartment of Gastroenterology and Hepatology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Yasuhito TanakaDepartment of Gastroenterology and Hepatology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Atsuya YamashitaDepartment of Microbiology, Faculty of Medicine, Graduate Faculty of Interdisciplinary Research, University of Yamanashi, Yamanashi, Japan.
Kohji MoriishiDivision of Hepatitis Virology, Institute for Genetic Medicine, Hokkaido University, Hokkaido, Japan.
Yoshiharu MatsuuraDepartment of Molecular Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Osamu TakeuchiDepartment of Medical Chemistry, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Tomokazu TamuraOne Health Research Center, Hokkaido University, Hokkaido, Japan.
Akinobu TaketomiDepartment of Gastroenterological Surgery 1, Graduate School of Medicine, Hokkaido University, Hokkaido, Japan.
Takasuke FukuharaLaboratory of Virus Control, Center for Infectious Disease Education and Research, Osaka University, Osaka, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chronic infection with hepatitis B virus (HBV) (chronic HBV infection) places patients at increased risk for liver cirrhosis and hepatocellular carcinoma. Although nucleos(t)ide analogues are mainly used for the treatment of HBV, they require long-term administration and may lead to the emergence of drug-resistant mutants. Therefore, to identify targets for the development of novel anti-HBV drugs, we screened for HBV-suppressive host factors using a plasmid expression library of RNA-binding proteins (RBPs). We tested the effect of 132 RBPs on HBV replication by ectopically expressing these proteins along with HBV in hepatocellular carcinoma and evaluated the intracellular capsid-associated HBV DNA level. Our screen identified NEDD4-binding protein 1 (N4BP1) as having an anti-HBV effect. In hepatocellular carcinoma cell lines transfected or infected with HBV, the overexpression of N4BP1 decreased core-associated HBV DNA levels, while knockdown or knockout of the gene encoding N4BP1 rescued core-associated HBV DNA levels. N4BP1 possesses the KH-like and RNase domains, and both were required for the anti-HBV effect of N4BP1. Additionally, we measured levels of HBV pregenomic RNA (pgRNA) and covalently closed circular DNA in the RBP-transfected cells and confirmed that N4BP1 binds pgRNA directly and regulates both the 3.5 and 2.4/2.1 kb HBV RNA. In summary, N4BP1 is a newly identified host factor able to counteract HBV production by regulating 3.5 and 2.1/2.4 kb HBV RNA.

Indexed as

Hepatitis B virusRNA-Binding ProteinsRNA, ViralVirus ReplicationCell Line, TumorDNA, ViralGene Expression Regulation, ViralHumansDNA, ViralRNA-Binding ProteinsRNA, Viralantiviralhepatitis B virusNEDD4-binding protein 1 (N4BP1)pregenomic RNARNA-binding protein

Identifiers

PMID40111401
PMCPMC12282332

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.