Evidence map›Paper›PMID 40110548›Full record

ArticleF1000Research2024

Novel gastrointestinal tools (GI Tools) for evaluating gut functional capacity in adults with environmental enteropathy in Zambia and Zimbabwe: A cross-sectional study protocol.

Tracy N Phiri, James W Weatherill, Elena Monford-Sanchez, Jose-Ivan Serrano-Contreras, Callum Melvin, Mirriam Kunaka, Ian Chisenga, Perpetual Ngalande, Monica N Mweetwa, Ellen Besa and 19 more

Abstract read
In one paragraph

Article in F1000Research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Tracy N PhiriTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.ORCID https://orcid.org/0000-0001-7110-3347
James W WeatherillStable Isotope Biochemistry, Scottish Universities Environmental Research Centre, East Kilbride, Scotland, G75 0QF, UK.ORCID https://orcid.org/0000-0002-5178-4269
Elena Monford-SanchezImperial College London Faculty of Medicine, London, England, W12 0NN, UK.
Jose-Ivan Serrano-ContrerasDepartment of Metabolism, Digestion and Reproduction, Imperial College London Section of Nutrition Research, London, England, W12 0NN, UK.
Callum MelvinSchool of Medicine Dentistry and Nursing, University of Glasgow College of Medical Veterinary and Life Sciences, Glasgow, Scotland, UK.
Mirriam KunakaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Ian ChisengaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Perpetual NgalandeTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Monica N MweetwaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Ellen BesaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Tafhima HaiderBlizard Institute, Queen Mary University of London Barts and The London School of Medicine and Dentistry, London, England, E1 2AT, UK.ORCID https://orcid.org/0000-0003-0077-3970
Nilanjan MandalImperial College London Faculty of Medicine, London, England, W12 0NN, UK.
Alex J ThompsonImperial College London Faculty of Medicine, London, England, W12 0NN, UK.
Christine A EdwardsSchool of Medicine Dentistry and Nursing, University of Glasgow College of Medical Veterinary and Life Sciences, Glasgow, Scotland, UK.
Claire D BourkeZvitambo Institute for Maternal and Child Health Research, Harare, Harare Province, Zimbabwe.
Ruairi C RobertsonBlizard Institute, Queen Mary University of London Barts and The London School of Medicine and Dentistry, London, England, E1 2AT, UK.
Joram M PosmaImperial College London Faculty of Medicine, London, England, W12 0NN, UK.ORCID https://orcid.org/0000-0002-4971-9003
Rosemary BandaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Mulima MwiingaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Lydia KazhilaTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Leolin KatsidziraDepartment of Internal Medicine, University of Zimbabwe College of Health Sciences, Harare, Harare Province, Zimbabwe.ORCID https://orcid.org/0000-0003-4815-5207
Mutsa Bwakura-DangarembiziZvitambo Institute for Maternal and Child Health Research, Harare, Harare Province, Zimbabwe.
Beatrice AmadiTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.
Isabel Garcia-PerezDepartment of Metabolism, Digestion and Reproduction, Imperial College London Section of Nutrition Research, London, England, W12 0NN, UK.
Kathryn MaitlandDepartment of Infectious Disease and Institute of Global Health and Innovation, Imperial College London Faculty of Medicine, London, England, UK.
Julian R MarchesiImperial College London Faculty of Medicine, London, England, W12 0NN, UK.
Douglas J MorrisonStable Isotope Biochemistry, Scottish Universities Environmental Research Centre, East Kilbride, Scotland, G75 0QF, UK.
Gary FrostDepartment of Metabolism, Digestion and Reproduction, Imperial College London Section of Nutrition Research, London, England, W12 0NN, UK.ORCID https://orcid.org/0000-0003-0529-6325
Paul KellyTropical Gastroenterology & Nutrition group, University of Zambia School of Medicine, Lusaka, Lusaka Province, Zambia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Environmental enteropathy (EE) is a highly prevalent subclinical inflammatory intestinal disorder associated with growth failure, impaired neurocognitive development, poor response to oral vaccines, and micronutrient deficiencies. However, EE research and clinical trials are hampered by the lack of non-invasive tools for measuring intestinal function in detail. This study aims to develop new tools for the measurement of multiple domains of gut functional capacity. Methods: The GI TOOLS project is a cross-sectional study that will recruit adults aged 18-65 years with EE in Lusaka, Zambia. Each participant will undergo assessment of gut functional capacity using novel near-point-of-care tools and provide multiple samples for detailed laboratory analyses. Participants will also undergo endoscopy for collection of duodenal biopsies. Novel techniques include stable isotopes approaches to measuring digestion, absorption, and bidirectional transmucosal amino acid flux, a non-invasive fluorescence tool for real-time evaluation of gut permeability, and assessment of reverse permeation of intravenous antibiotics to be carried out separately in Zimbabwe. Stool and duodenal microbiome sequencing using MinION sequencing, metabolome analysis applied to plasma and intestinal fluids, blood immune cell phenotyping, Anticipated outcomes: Based on this extensive phenotyping, tests will be developed which can be simplified and refined for use in adults and children with EE, and for clinical trials. Findings from this project will be disseminated through in-person meetings with caregivers and regulatory bodies, presentations at conferences and in peer-reviewed journals.

Indexed as

Intestinal DiseasesAdolescentAdultAgedCross-Sectional StudiesFemaleGastrointestinal MicrobiomeHumansMaleMiddle AgedYoung AdultZambiaZimbabweEnvironmental Enteric DysfunctionIntestinal AbsorptionIntestinal PermeabilityMicrobiomeStable Isotopes

Identifiers

PMID40110548
PMCPMC11920692

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.