Evidence map›Paper›PMID 40109892›Full record

ArticleZooKeys2025

Genomic investigation of benthic invertebrates from the Clarion-Clipperton fields of polymetallic nodules.

Romain Gastineau, Kamila Mianowicz, Przemysław Dąbek, Christian Otis, Valcana Stoyanova, Artur Krawcewicz, Tomasz Abramowski

Abstract read
In one paragraph

Article in ZooKeys, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Romain GastineauInstitute of Marine and Environmental Sciences, University of Szczecin, ul. Mickiewicza 16a, Szczecin, 70-383, Poland University of Szczecin Szczecin Poland.ORCID https://orcid.org/0000-0001-8661-5118
Kamila MianowiczInteroceanmetal Joint Organization, ul. Cyryla i Metodego 9-9A, Szczecin, 71-541, Poland Interoceanmetal Joint Organization Szczecin Poland.ORCID https://orcid.org/0000-0002-7755-3258
Przemysław DąbekInstitute of Marine and Environmental Sciences, University of Szczecin, ul. Mickiewicza 16a, Szczecin, 70-383, Poland University of Szczecin Szczecin Poland.ORCID https://orcid.org/0000-0002-3736-3011
Christian OtisPlateforme d'Analyse Génomique, Institut de biologie intégrative et des systèmes, Université Laval, Québec, QC, Canada Université Laval Québec Canada.ORCID https://orcid.org/0000-0001-9680-5863
Valcana StoyanovaInteroceanmetal Joint Organization, ul. Cyryla i Metodego 9-9A, Szczecin, 71-541, Poland Interoceanmetal Joint Organization Szczecin Poland.
Artur KrawcewiczInteroceanmetal Joint Organization, ul. Cyryla i Metodego 9-9A, Szczecin, 71-541, Poland Interoceanmetal Joint Organization Szczecin Poland.
Tomasz AbramowskiMaritime University of Szczecin, ul. Wały Chrobrego 1-2, Szczecin, 70-500, Poland Maritime University of Szczecin Szczecin Poland.ORCID https://orcid.org/0000-0002-9029-406X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The abyssal plains of the Clarion-Clipperton Zone (CCZ) are famous for their fields of polymetallic nodules, which are inhabited by benthic invertebrates. Ten specimens from the Interoceanmetal Joint Organisation (IOM) licence area in the CCZ were collected in 2014 and submitted to a short-read genome skimming sequencing. In total, mitochondrial genomes and nuclear ribosomal genes were retrieved for nine different organisms belonging to Ophiuroidea, Holothuroidea, Polychaeta, Bryozoa, Porifera, and Brachiopoda (assigned to these phyla immediately upon retrieval from the seafloor). As many of these samples were partial and physically deteriorated following their seven-year storage in IOM's collections, their morphology-based taxonomic identification could rarely be performed at the lowest possible level (species or genus) prior to preparing the samples for molecular or genomic investigations. Therefore, it was not possible to apply the reverse identification scheme recommended for such investigations. However, several of these specimens represent poorly studied groups for which few molecular references are available as of now. In two cases, the presence of introns in the mitochondrial genome questions the practicability of using the

Indexed as

BrachiopodaBryozoagenome-skimmingHolothuroideaintronsMitochondrial genomesOphiuroideaPolychaetaPoriferaribosomal RNA genes

Identifiers

PMID40109892
PMCPMC11915014

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.