Evidence map›Paper›PMID 40108086›Full record

ArticleEcotoxicology (London, England)2025

Comprehensive machine learning assessment of zebrafish behaviour and biochemical markers in response to caffeine exposure.

Cláudia Teixeira, Sara Rodrigues, João Amorim, Bárbara S Diogo, Ivo Pinto, António Paulo Carvalho, Sara C Antunes, Luís Oliva Teles

Abstract read
In one paragraph

Article in Ecotoxicology (London, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Cláudia TeixeiraDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal. claudia.teixeira@ciimar.up.pt.
Sara RodriguesDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
João AmorimDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Bárbara S DiogoDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Ivo PintoDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
António Paulo CarvalhoDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Sara C AntunesDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Luís Oliva TelesDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.

Funding

Fundação para a Ciência e a Tecnologia 2022.10117.BDFundação para a Ciência e a Tecnologia 2022.10194.BDFundação para a Ciência e a Tecnologia 2022.10505.BDFundação para a Ciência e a Tecnologia doi: 10.54499/2020.00464.CEECIND/CP1599/CT0002Fundação para a Ciência e a Tecnologia SFRH/BD/135681/2018
6 · The paper itself

Abstract

Environmental exposure to caffeine (CAF) poses potential risks to aquatic ecosystems, affecting non-target species. This study investigated the chronic effects of environmentally relevant CAF concentrations, ranging from 0.16-50 µg/L, on zebrafish behaviour. A Kohonen-type artificial neural network classified zebrafish behaviour into nine behavioural classes based on a set of movement descriptors (mean meander, mean velocity, instantaneous velocity, distance to centre point, mean angular velocity and instantaneous acceleration), while a comprehensive analysis integrated behavioural classes previously defined and biochemical markers of oxidative stress, lipid peroxidation, reserve energy content, energetic pathways, and neurotoxicity. The discriminant analysis demonstrated that behaviour descriptors and biomarkers individually explained 38% and 67% of data variation, respectively, while the combination resulted in 19 models with 100% correct diagnosis. One of the models (Model A) seemed to suit the best dose-response relationship, incorporating key biomarkers including superoxide dismutase, catalase, glutathione peroxidase activities, and behavioural characteristics such as movement distance and velocity. This suggested methodology offers a different approach to evaluating CAF's ecological impact, highlighting behavioural analysis as a valuable complement to traditional ecotoxicological assessments. This study provides a novel framework for understanding organism-level responses to environmental stressors (e.g., several anthropogenic compounds), utilising Mahalanobis distance as an integrative response index. This approach shows promise for broader application in assessing the impact of various aquatic contaminants on aquatic organisms (from bacteria to fish), potentially extending to pharmaceuticals, pesticides, and industrial pollutants.

Indexed as

Behavior, AnimalCaffeineEnvironmental MonitoringMachine LearningWater Pollutants, ChemicalZebrafishAnimalsBiomarkersOxidative StressBiomarkersCaffeineWater Pollutants, ChemicalBiochemical markersDanio rerioEcotoxicologyIntegrated assessmentLocomotor behaviourMahalanobis distance

Identifiers

PMID40108086
PMCPMC12254161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.