Evidence map›Paper›PMID 40107456›Full record

Observational studyAmerican journal of infection control2025

Changing trends in the sources and volumes of clinical cultures with Candida auris at an integrated health system in Miami, Florida, United States, 2019-2023.

Rossana Rosa, Rodrigo de Paula Baptista, Truc T Tran, Safoura Eskandari, Gemma Rosello, Cesar A Arias, Octavio V Martinez, Lilian M Abbo

Abstract readObservational Study
In one paragraph

Observational study in American journal of infection control, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Multicenter performance evaluation of the SimplexaJournal of clinical microbiology · 2026
    Article
  2. Article
  3. Candidiasis epidemiology and outcomes including emergence ofAntimicrobial stewardship & healthcare epidemiology : ASHE · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rossana RosaInfection Prevention and Control Program, Jackson Health System, Miami, FL. Electronic address: rossana.rosa@jhsmiami.org.
Rodrigo de Paula BaptistaDivision of Infectious Diseases, Houston Methodist Hospital, Houston, TX; Center for Infectious Diseases, Houston Methodist Research Institute, Houston, TX; Department of Medicine, Weill Cornell Medical College, New York City, NY.
Truc T TranDivision of Infectious Diseases, Houston Methodist Hospital, Houston, TX; Center for Infectious Diseases, Houston Methodist Research Institute, Houston, TX; Department of Medicine, Weill Cornell Medical College, New York City, NY.
Safoura EskandariMicrobiology Section, Jackson Memorial Hospital, Miami, FL.
Gemma RoselloInfection Prevention and Control Program, Jackson Health System, Miami, FL.
Cesar A AriasDivision of Infectious Diseases, Houston Methodist Hospital, Houston, TX; Center for Infectious Diseases, Houston Methodist Research Institute, Houston, TX; Department of Medicine, Weill Cornell Medical College, New York City, NY.
Octavio V MartinezMicrobiology Section, Jackson Memorial Hospital, Miami, FL; Department of Pathology and Laboratory Medicine, University of Miami Miller School of Medicine, Miami, FL.
Lilian M AbboInfection Prevention and Control Program, Jackson Health System, Miami, FL; Division of Infectious Diseases, Department of Medicine, University of Miami Miller School of Medicine, Miami, FL.

Funding

Project 3: Functional Microbiome and Host Signatures in Transition from Commensal to pathogenP01AI152999 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO, SAVIDGE, TOR C. · 2020 to 2025
$12.0M
The LiaFSR system and antimicrobial peptide resistance in enterococciR01AI134637 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Cesar Augusto Arias · 2018 to 2026
$3.7M
NIAID NIH HHS P01 AI152999NIAID NIH HHS R01 AI134637
6 · The paper itself

Abstract

backgroundCandida auris (C auris) has rapidly spread in the United States. We aimed to characterize the trends in volumes and sources of clinical cultures with C auris at a large health care system.

methodsWe conducted a retrospective observational study including clinical cultures with C auris collected between April 1, 2019, and December 31, 2023. Surveillance cultures were excluded. Clinical specimens were processed through routine methods, and identification was performed using mass spectrometry. Whole-genome sequencing was performed on select specimens.

resultsWe identified 327 clinical cultures belonging to 231 unique patients. The number of clinical cultures increased each year, from 5 in 2019 to 29 in 2020 (580%), 71 in 2021 (251% relative to 2020), 107 in 2022 (46% relative to 2021), and 115 in 2023 (7% relative to 2022). Blood cultures were the most common source, but specimens originating from soft tissue/bone infections had a large increase in 2022 and 2023. All sequenced isolates belong to clade III (South African clade) and were resistant to fluconazole and susceptible to echinocandins and amphotericin B.

conclusionsThe volumes of clinical cultures with C auris have rapidly increased, accompanied by an expansion in the sources of infection.

Indexed as

CandidaCandida aurisCandidiasisAdultAgedAged, 80 and overAntifungal AgentsCandidiasis, InvasiveFemaleFloridaHumansMaleMicrobial Sensitivity TestsMiddle AgedRetrospective StudiesWhole Genome SequencingAntifungal AgentsAzolesCandidemiaResistanceWhole-genome sequencing

Identifiers

PMID40107456
PMCPMC13141654

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.