Evidence map›Paper›PMID 40105351›Full record

ArticlemBio2025

Penton blooming, a conserved mechanism of genome delivery used by disparate microviruses.

Pavol Bardy, Conor I W MacDonald, Paul C Kirchberger, Huw T Jenkins, Tibor Botka, Lewis Byrom, Nawshin T B Alim, Daouda A K Traore, Hannah C Koenig, Tristan R Nicholas and 7 more

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Pavol BardyYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.ORCID 0000-0002-1223-2584
Conor I W MacDonaldYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
Paul C KirchbergerDepartment of Microbiology & Molecular Genetics, Oklahoma State University, Tulsa, USA.
Huw T JenkinsYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
Tibor BotkaDepartment of Experimental Biology, Faculty of Science, Masaryk University, Brno, Czechia.ORCID 0000-0003-2708-3718
Lewis ByromYork Biomedical Research Institute, University of York, York, United Kingdom.
Nawshin T B AlimDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, Canada.
Daouda A K TraoreMaterials and Structural Analysis, Thermo Fisher Scientific, Eindhoven, Netherlands.
Hannah C KoenigDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, Canada.
Tristan R NicholasYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
Maria ChechikYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
Samuel J HartYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
Johan P TurkenburgYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.
James N BlazaYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.ORCID 0000-0001-5420-2116
J Thomas BeattyDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, Canada.ORCID 0000-0002-1425-0532
Paul C M FoggYork Biomedical Research Institute, University of York, York, United Kingdom.ORCID 0000-0001-5324-4293
Alfred A AntsonYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, United Kingdom.ORCID 0000-0002-4533-3816

Funding

The Stanford-SLAC CryoEM Center supplementU24GM129541 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH, HEDMAN, BRITT · 2018 to 2023
$54.8M
The adolescent microbiome-gut-brain axis as a potential target in opioid abuse disordersP20GM152333 · NIGMS · OKLAHOMA STATE UNIVERSITY STILLWATER · PI Crystal Nicole Johnson · 2024 to 2026
$8.7M
Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada (CRSNG) RGPIN 2018-03898Deutscher Akademischer Austauschdienst (DAAD) 28535HHS | NIH | National Institute of General Medical Sciences (NIGMS) 1P20GM152333-01:8040NIGMS NIH HHS P20 GM152333NIGMS NIH HHS U24 GM129541Wellcome TrustWellcome Trust 206377Wellcome Trust (WT) 109363/Z/15/AWellcome Trust (WT) 224067/Z/21/Z
6 · The paper itself

Abstract

Microviruses are single-stranded DNA viruses infecting bacteria, characterized by T = 1 shells made of single jelly-roll capsid proteins. To understand how microviruses infect their host cells, we have isolated and studied an unusually large microvirus, Ebor. Ebor belongs to the proposed "Tainavirinae" subfamily of IMPORTANCE: Tailless

Indexed as

Genome, ViralMicroviridaeCapsidCapsid ProteinsCryoelectron MicroscopyCapsid Proteinselectron microscopyMicroviridaeRhodobacterstructural biologyvirion structure

Identifiers

PMID40105351
PMCPMC11980548

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.