Evidence map›Paper›PMID 40098103›Full record

ArticleBMC plant biology2025

Comparative phenotypic, physiological, and transcriptomic responses to drought and recovery in two Fraxinus species.

Tae-Lim Kim, Hyemin Lim, Kyungmi Lee, Michael Immanuel Jesse Denison, Sathishkumar Natarajan, Changyoung Oh

Abstract readComparative Study
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tae-Lim KimDepartment of Forest Bioresources, National Institute of Forest Science, Suwon, 16631, Korea.
Hyemin LimDepartment of Forest Bioresources, National Institute of Forest Science, Suwon, 16631, Korea. supia1125@korea.kr.
Kyungmi LeeDepartment of Forest Bioresources, National Institute of Forest Science, Suwon, 16631, Korea. kmile@korea.kr.
Michael Immanuel Jesse Denison3BIGS CO. Ltd, Hwaseong, 18469, Republic of Korea.
Sathishkumar Natarajan3BIGS CO. Ltd, Hwaseong, 18469, Republic of Korea.
Changyoung OhDepartment of Forest Bioresources, National Institute of Forest Science, Suwon, 16631, Korea.

Funding

National Institute of Forest Science of the Republic of Korea FG0401-2024-01-2025
6 · The paper itself

Abstract

backgroundThis study focused on the drought tolerance and resilience of two ash species: Fraxinus chiisanensis and F. rhynchophylla. These two species are distributed in different habitats, suggesting that they have different levels of drought tolerance. Understanding their response to drought stress, particularly during the seedling stage, is crucial for selecting and developing drought-resistant varieties. This study aimed to compare the phenotypic, physiological, and transcriptomic characteristics of drought-stressed and recovered rewatered plants in a time-course experiment.

resultsIn F. rhynchophylla, drought stress resulted in more severe growth retardation, temperature increase, and a faster decline in the fluorescence response, accompanied by a significant rise in stress indices. However, these reactions recovered quickly after rehydration. In contrast, F. chiisanensis exhibited less growth retardation, a slower decline in fluorescence, and milder increases in stress indices, although many individuals did not fully recover after rehydration. The activity of antioxidant enzymes (SOD, CAT, APX) was more responsive and recovered more efficiently in F. rhynchophylla, while F. chiisanensis had a weaker and delayed response. Transcriptome analysis revealed that photosynthesis and enzyme activity were the most responsive to drought and recovery, as shown by Gene Ontology term analysis. Kyoto Encyclopedia of Genes and Genomes pathway analysis identified common pathways involved in starch and sucrose metabolism and phenylpropanoid biosynthesis in both species. F. rhynchophylla had more differentially expressed genes (DEGs) than F. chiisanensis, particularly on the drought and recovery day 6. Most drought-induced DEGs were restored after rehydration. Commonly associated genes included BGLU and TPS in sugar metabolism; CAT, GSTF, TT7, and HCT in antioxidant enzymes; PYL4 and RR17 in hormone signaling; and ADC1 and ASP3 in proline synthesis.

conclusionsThis study highlights the species-specific characteristics of drought and recovery responses of two Fraxinus species and provides targets for assessing and improving drought tolerance. Moreover, the results of this study provide insights into the physiological and genetic responses of Fraxinus and may guide future research on ash tree stress tolerance.

Indexed as

DroughtsFraxinusTranscriptomeGene Expression ProfilingGene Expression Regulation, PlantPhenotypePhotosynthesisSpecies SpecificityStress, PhysiologicalDrought stress5Fraxinus chiisanensis1Fraxinus rhynchophylla2Physiological response4transcriptome3

Identifiers

PMID40098103
PMCPMC11916329

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.