Evidence map›Paper›PMID 40097976›Full record

ArticleBMC genomics2025

Comparative transcriptome analysis reveals differences in immune responses to copper ions in Sepia esculenta under high-temperature conditions.

Yancheng Zhao, Deyuan Chang, Yanxuan Zheng, Yuwei Zhang, Yongjie Wang, Xiaokai Bao, Guohua Sun, Yanwei Feng, Zan Li, Xiumei Liu and 1 more

Abstract readComparative Study
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Combined Effects of Heat and CdAnimals : an open access journal from MDPI · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yancheng ZhaoSchool of Fisheries, Ludong University, Yantai, 264025, China.
Deyuan ChangSchool of Fisheries, Ludong University, Yantai, 264025, China.
Yanxuan ZhengRushan Marine and Fishery Monitoring and Hazard Mitigation Center, Rushan, 264500, China.
Yuwei ZhangSchool of Fisheries, Ludong University, Yantai, 264025, China.
Yongjie WangSchool of Fisheries, Ludong University, Yantai, 264025, China.
Xiaokai BaoSchool of Fisheries, Ludong University, Yantai, 264025, China.
Guohua SunSchool of Fisheries, Ludong University, Yantai, 264025, China.
Yanwei FengSchool of Fisheries, Ludong University, Yantai, 264025, China.
Zan LiSchool of Fisheries, Ludong University, Yantai, 264025, China. lizanlxm@163.com.
Xiumei LiuCollege of Life Sciences, Yantai University, Yantai, 264005, China. xiumei0210@163.com.
Jianmin YangSchool of Fisheries, Ludong University, Yantai, 264025, China. ladderup@126.com.

Funding

the earmarked fund for the Modern Agro-industry Technology Research System CARS-49the Natural Science Foundation of Shandong Province No. ZR2019BC052
6 · The paper itself

Abstract

Sepia esculenta is one of the most abundant extant squid populations in Southeast Asia and is of interest due to its rapid reproductive rate and high commercial value. In recent years, with the rapid development of industrialization, issues such as global warming and heavy metal pollution in the oceans have emerged, posing a serious threat to the life activities of marine organisms. In this study, we used transcriptomic techniques to investigate the differences in Cu exposure immune responses in S. esculenta larvae under different temperature conditions. The enrichment of solute carrier family (SLC) genes and genes related to DNA replication and damage was significantly higher in the CuT group than in the Cu group. Functional enrichment analysis revealed that the FcγR-mediated phagocytosis and autophagy pathways were enriched in the CuT group. Based on the analysis of differentially expressed genes (DEGs) and functional enrichment results, we can preliminarily infer that the CuT group caused more severe disruption of intercellular ion transport and DNA replication and repair in larvae compared to the Cu group. This may have further interfered with the normal physiological activities of S. esculenta larvae. Overall, at high temperatures, Cu exposure induces a more intense inflammatory response. The results of this study provide a theoretical foundation for researchers to further understand the effects of environmental factors on the immunity of S. esculenta larvae, as well as preliminary insights into the enhanced toxic effects of metallic copper on aquatic organisms under high-temperature conditions.

Indexed as

CopperGene Expression ProfilingHot TemperatureSepiaTranscriptomeAnimalsLarvaCopperCu co-exposureHeavy metalImmunitySepia esculentaTranscriptome

Identifiers

PMID40097976
PMCPMC11917092

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.