Evidence map›Paper›PMID 40097733›Full record

ArticleNature cardiovascular research2025

Mapping the transcriptional and epigenetic landscape of organotypic endothelial diversity in the developing and adult mouse.

Manuel E Cantu Gutierrez, Matthew C Hill, Gabrielle E Largoza, William B Gillespie, James F Martin, Joshua D Wythe

Abstract read
In one paragraph

Article in Nature cardiovascular research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Manuel E Cantu Gutierrez *Graduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX, USA.
Matthew C Hill *Graduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX, USA.
Gabrielle E LargozaDepartment of Cell Biology, University of Virginia School of Medicine, Charlottesville, VA, USA.
William B GillespieDepartment of Cell Biology, University of Virginia School of Medicine, Charlottesville, VA, USA.ORCID http://orcid.org/0009-0009-3848-8308
James F MartinGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0002-7842-9857
Joshua D WytheGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX, USA. jwythe@virginia.edu.ORCID http://orcid.org/0000-0002-3225-2937

Funding

BASIC CARDIOVASCULAR RESEARCH TRAINING GRANTT32HL007284 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Brant E Isakson, Gary K Owens · 1985 to 2026
$19.6M
Pitx2 in atrial fibrillationR01HL118761 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MARTIN, JAMES F · 2014 to 2025
$6.1M
Hippo and Wnt Signaling in Cardiac RegenerationR01HL127717 · NHLBI · TEXAS HEART INSTITUTE · PI MARTIN, JAMES F · 2016 to 2023
$4.4M
Optical elastography for assessment of myocardial regenerationR01HL130804 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LARIN, KIRILL V, MARTIN, JAMES F · 2016 to 2019
$2.9M
Decoding the Molecular and Cellular Mechanisms of Mutant KRAS-driven Brain Arteriovenous MalformationsR01HL159159 · NHLBI · UNIVERSITY OF VIRGINIA · PI WYTHE, JOSHUA D. · 2022 to 2025
$2.6M
The transcriptional landscapes and cell states of regenerative cardiomyocytesF31HL136065 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI HILL, MATTHEW CRAIG · 2017 to 2019
$134k
American Heart Association (American Heart Association, Inc.) 16GRNT31330023American Heart Association (American Heart Association, Inc.) 19PRE34410104NHLBI NIH HHS F31 HL136065NHLBI NIH HHS R01 HL118761NHLBI NIH HHS R01 HL127717NHLBI NIH HHS R01 HL130804NHLBI NIH HHS R01 HL159159NHLBI NIH HHS T32 HL007284U.S. Department of Health & Human Services | National Institutes of Health (NIH) HL127717, HL130804, HL118761U.S. Department of Health & Human Services | National Institutes of Health (NIH) HL136065U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL159159U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) T32HL007284
6 · The paper itself

Abstract

The vascular endothelium features unique molecular and functional properties across different vessel types, such as between arteries, veins and capillaries, as well as between different organs, such as the leaky sinusoidal endothelium of the liver versus the impermeable vessels of the brain. However, the transcriptional networks governing endothelial organ specialization remain unclear. Here we profile the accessible chromatin and transcriptional landscapes of the endothelium from the mouse liver, lung, heart, kidney, brain and retina, across developmental time, to identify potential transcriptional regulators of endothelial heterogeneity. We then determine which of these putative regulators are conserved in human brain endothelial cells, and using single-cell transcriptomic profiling, we define which regulatory networks are active during brain maturation. Finally, we show that the putative transcriptional regulators identified by these three approaches molecularly and functionally reprogram naive endothelial cells. Thus, this resource can be used to identify potential transcriptional regulators controlling the establishment and maintenance of organ-specific endothelial specialization.

Indexed as

Endothelial CellsEndothelium, VascularEpigenesis, GeneticTranscriptomeAnimalsBrainChromatinGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Regulatory NetworksHumansMiceMice, Inbred C57BLOrgan SpecificitySingle-Cell AnalysisChromatin

Identifiers

PMID40097733
PMCPMC12023908

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.